RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	PLA2G4D	Q86XP0	818 aa		12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	MBOAT7	Q96N66	472 aa		12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	USP28	Q96RU2	1077 aa		12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	IWS1	Q96ST2	819 aa		12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	EHMT1	Q9H9B1	1298 aa		12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	JADE2	Q9NQC1	790 aa		12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	DDX25	Q9UHL0	483 aa	Known RBP	12.81	□□□□□ -0.36
CERS3-208	ENST00000560944	MEIS1	O00470	390 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	MSH4	O15457	936 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	EIF3J	O75822	258 aa	Known RBP	12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	KCNA2	P16389	499 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	CIITA	P33076	1130 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	PRMT2	P55345	433 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	DNM1	Q05193	864 aa	Known RBP	12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	ARHGEF6	Q15052	776 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	CCDC62	Q6P9F0	684 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	ETNPPL	Q8TBG4	499 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	PXYLP1	Q8TE99	480 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	PPP1R13L	Q8WUF5	828 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	AGO4	Q9HCK5	861 aa	Known RBP	12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	VTA1	Q9NP79	307 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	TFIP11	Q9UBB9	837 aa	Known RBP	12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	CNPY2	Q9Y2B0	182 aa		12.8	□□□□□ -0.36
CERS3-208	ENST00000560944	DNAH12	Q6ZR08	3092 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	CCL5	P13501	91 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	GRIN1	Q05586	938 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	MTMR1	Q13613	665 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	IL17A	Q16552	155 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	C4orf32	Q8N8J7	132 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	HAS1	Q92839	578 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	ZNF333	Q96JL9	665 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	KCNH7	Q9NS40	1196 aa		12.79	□□□□□ -0.36
CERS3-208	ENST00000560944	TCHH	Q07283	1943 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	RBM47	A0AV96	593 aa	Known RBP	12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	SPATA31C2	B4DYI2	1134 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	CHMP2A	O43633	222 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	GGPS1	O95749	300 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	CCNE2	O96020	404 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	PGK1	P00558	417 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	CYP3A7	P24462	503 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	BEX3	Q00994	111 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	ARHGAP1	Q07960	439 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	CYFIP1	Q7L576	1253 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	BRAP	Q7Z569	592 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	MSL3	Q8N5Y2	521 aa	Known RBP	12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	MAF1	Q9H063	256 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	ABHD16B	Q9H3Z7	469 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	GDPD2	Q9HCC8	539 aa		12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	DDX41	Q9UJV9	622 aa	Known RBP	12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	NOL7	Q9UMY1	257 aa	Known RBP	12.78	□□□□□ -0.36
CERS3-208	ENST00000560944	PP2D1	A8MPX8	630 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	CTAGE5	O15320	804 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	DHX15	O43143	795 aa	Known RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	FIBP	O43427	364 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	NEMF	O60524	1076 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	MYCN	P04198	464 aa	Predicted RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	TXN	P10599	105 aa	Known RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	MARCKS	P29966	332 aa	Predicted RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	USP11	P51784	963 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	TNFAIP2	Q03169	654 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	PTPA	Q15257	358 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	SF3A1	Q15459	793 aa	Known RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	CALCRL	Q16602	461 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944		Q4G0T1	1027 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	TPRN	Q4KMQ1	711 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	XRRA1	Q6P2D8	792 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	TRIM50	Q86XT4	487 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	TRMT44	Q8IYL2	757 aa	Known RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	SCFD2	Q8WU76	684 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	SLC5A5	Q92911	643 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	ARMC5	Q96C12	935 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	GPRASP2	Q96D09	838 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	ZNF577	Q9BSK1	485 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	UNC45A	Q9H3U1	944 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	KCNMB3	Q9NPA1	279 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	VAV3	Q9UKW4	847 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	GNE	Q9Y223	722 aa	Known RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	SYNRG	Q9UMZ2	1314 aa		12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	MKI67	P46013	3256 aa	Known RBP	12.77	□□□□□ -0.37
CERS3-208	ENST00000560944	SEPT4	O43236	478 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	DYNC1LI2	O43237	492 aa	Predicted RBP	12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	FARP2	O94887	1054 aa	Predicted RBP	12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	ICAM3	P32942	547 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	PTGDR	Q13258	359 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	TTLL4	Q14679	1199 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	LHX8	Q68G74	356 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	MCTP2	Q6DN12	878 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	PPP4R3A	Q6IN85	833 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	NIPA1	Q7RTP0	329 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	TLK2	Q86UE8	772 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	NLRX1	Q86UT6	975 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	TEX2	Q8IWB9	1127 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	OR6J1	Q8NGC5	347 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	AFG1L	Q8WV93	481 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	DEFB118	Q96PH6	123 aa		12.76	□□□□□ -0.37
CERS3-208	ENST00000560944	MTMR9	Q96QG7	549 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms