RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
TRPM1-212ENST00000560801 MRPS27Q92552 414 aaKnown RBP10.72□□□□□ -0.69
TRPM1-212ENST00000560801 KMT5AQ9NQR1 393 aa10.72□□□□□ -0.69
TRPM1-212ENST00000560801 ERAP1Q9NZ08 941 aa10.72□□□□□ -0.69
TRPM1-212ENST00000560801 ZNF609O15014 1411 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 KCNA4P22459 653 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 ARMCX2Q7L311 632 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 TLK2Q86UE8 772 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 MTMR14Q8NCE2 650 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 TTC12Q9H892 705 aaPredicted RBP10.71□□□□□ -0.69
TRPM1-212ENST00000560801 RRN3P2A6NIE6 340 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 TBC1D12O60347 775 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 EPB41P11171 864 aaKnown RBP10.71□□□□□ -0.69
TRPM1-212ENST00000560801 CD19P15391 556 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 BIRC2Q13490 618 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 ACVR2BQ13705 512 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 TDRD12Q587J7 1177 aaKnown RBP10.71□□□□□ -0.69
TRPM1-212ENST00000560801 DCAF17Q5H9S7 520 aaPredicted RBP10.71□□□□□ -0.69
TRPM1-212ENST00000560801 ISM2Q6H9L7 571 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 RHPN2Q8IUC4 686 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 MTUS1Q9ULD2 1270 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 KIAA1024Q9UPX6 916 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 PCDHA10Q9Y5I2 948 aa10.71□□□□□ -0.69
TRPM1-212ENST00000560801 SHPRHQ149N8 1683 aa10.71□□□□□ -0.7
TRPM1-212ENST00000560801 VWA5AO00534 786 aa10.71□□□□□ -0.7
TRPM1-212ENST00000560801 IFNAR1P17181 557 aa10.71□□□□□ -0.7
TRPM1-212ENST00000560801 GJC2Q5T442 439 aaPredicted RBP10.71□□□□□ -0.7
TRPM1-212ENST00000560801 CCDC70Q6NSX1 233 aa10.71□□□□□ -0.7
TRPM1-212ENST00000560801 FBXO46Q6PJ61 603 aaPredicted RBP10.71□□□□□ -0.7
TRPM1-212ENST00000560801 ZNF668Q96K58 619 aaPredicted RBP10.71□□□□□ -0.7
TRPM1-212ENST00000560801 SLC28A3Q9HAS3 691 aa10.71□□□□□ -0.7
TRPM1-212ENST00000560801 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 K7ERI5 159 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 PGK1P00558 417 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 PDHBP11177 359 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 CEP55Q53EZ4 464 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 C1orf228Q6PIY5 440 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 CATSPERGQ6ZRH7 1159 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 RASAL3Q86YV0 1011 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 NOSTRINQ8IVI9 506 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 MTA3Q9BTC8 594 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 SRRDQ9UH36 339 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 COL4A3BPQ9Y5P4 624 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 GLI3P10071 1580 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 CTAGE5O15320 804 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 JAK2O60674 1132 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 PAK2Q13177 524 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 POSTNQ15063 836 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 FSCN1Q16658 493 aaKnown RBP10.7□□□□□ -0.7
TRPM1-212ENST00000560801 DSTYKQ6XUX3 929 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 CCAR2Q8N163 923 aaKnown RBP10.7□□□□□ -0.7
TRPM1-212ENST00000560801 PGBD4Q96DM1 585 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 LSG1Q9H089 658 aaKnown RBP10.7□□□□□ -0.7
TRPM1-212ENST00000560801 GAKO14976 1311 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 MAGEB2O15479 319 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 STX10O60499 249 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 OSTNP61366 133 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 MLLT1Q03111 559 aaPredicted RBP10.7□□□□□ -0.7
TRPM1-212ENST00000560801 PRKCZQ05513 592 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 GRIK5Q16478 980 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 GLB1LQ6UWU2 654 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 RNF214Q8ND24 703 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 NOX5Q96PH1 765 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 ANO10Q9NW15 660 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 ADCYAP1R1P41586 468 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 MAPK6Q16659 721 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 MCPH1Q8NEM0 835 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 VTA1Q9NP79 307 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
TRPM1-212ENST00000560801 MROH7Q68CQ1 1323 aa10.7□□□□□ -0.7
TRPM1-212ENST00000560801 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 CALUO43852 315 aaPredicted RBP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 PFKFB2O60825 505 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 SHMT1P34896 483 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 SNX16P57768 344 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 XRRA1Q6P2D8 792 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 POMGNT1Q8WZA1 660 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 GTF3C6Q969F1 213 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 TMEM169Q96HH4 297 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 RIOK1Q9BRS2 568 aaKnown RBP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 RPLP2P05387 115 aaKnown RBP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 CNNM4Q6P4Q7 775 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 SLC17A8Q8NDX2 589 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 BRI3BPQ8WY22 251 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 TAAR1Q96RJ0 339 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 ATP6V0A4Q9HBG4 840 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 PIN4Q9Y237 131 aaKnown RBP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 COL3A1P02461 1466 aaPredicted RBP10.69□□□□□ -0.7
TRPM1-212ENST00000560801 BICDL2A1A5D9 508 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 CETN3O15182 167 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 SLC10A3P09131 477 aa10.69□□□□□ -0.7
TRPM1-212ENST00000560801 STAG2Q8N3U4 1231 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms