RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 EMSYQ7Z589 1322 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 LINC00271P0C7V0 271 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 SNHG28P0DPA3 235 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 HOXD8P13378 290 aaPredicted RBP11.65□□□□□ -0.54
TPM1-225ENST00000560679 CASTP20810 708 aaKnown RBP11.65□□□□□ -0.54
TPM1-225ENST00000560679 HYAL1Q12794 435 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 CLUL1Q15846 466 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 KIAA0753Q2KHM9 967 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 USH1GQ495M9 461 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 PLEKHG4Q58EX7 1191 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 IER5LQ5T953 404 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 EP400NLQ6ZTU2 488 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 PPTC7Q8NI37 304 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 MFSD14AQ96MC6 490 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 TAAR1Q96RJ0 339 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 YME1L1Q96TA2 773 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 CPVLQ9H3G5 476 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 ALG13Q9NP73 1137 aaKnown RBP11.65□□□□□ -0.54
TPM1-225ENST00000560679 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
TPM1-225ENST00000560679 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
TPM1-225ENST00000560679 CACNA1HO95180 2353 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.64□□□□□ -0.55
TPM1-225ENST00000560679 MBTPS2O43462 519 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 TBX10O75333 385 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 MS4A1P11836 297 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 HOXC8P31273 242 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 TCF15Q12870 199 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 SERINC5Q86VE9 423 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 RGS22Q8NE09 1264 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 SYTL5Q8TDW5 730 aaPredicted RBP11.64□□□□□ -0.55
TPM1-225ENST00000560679 OTUD7AQ8TE49 926 aaPredicted RBP11.64□□□□□ -0.55
TPM1-225ENST00000560679 TOP1MTQ969P6 601 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 MYH7BA7E2Y1 1941 aa11.64□□□□□ -0.55
TPM1-225ENST00000560679 RSPH10B2B2RC85 870 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 B4DLN1 442 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 RSPH10BP0C881 870 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 THPOP40225 353 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 MRPL12P52815 198 aaKnown RBP11.63□□□□□ -0.55
TPM1-225ENST00000560679 RNF135Q8IUD6 432 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 UPF3BQ9BZI7 483 aaKnown RBP11.63□□□□□ -0.55
TPM1-225ENST00000560679 TCP11L1Q9NUJ3 509 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 PNMA2Q9UL42 364 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 DCHS1Q96JQ0 3298 aa11.63□□□□□ -0.55
TPM1-225ENST00000560679 ZFHX2Q9C0A1 2572 aaPredicted RBP11.63□□□□□ -0.55
TPM1-225ENST00000560679 SPTBN4Q9H254 2564 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 C5orf67F2Z3F1 127 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 LINC01565O15544 149 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 RGS20O76081 388 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 UPP2O95045 317 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
TPM1-225ENST00000560679 GTF2F1P35269 517 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM1-225ENST00000560679 PTPN5P54829 565 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
TPM1-225ENST00000560679 STXBP2Q15833 593 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 HSDL1Q3SXM5 330 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 RRP12Q5JTH9 1297 aaKnown RBP11.62□□□□□ -0.55
TPM1-225ENST00000560679 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 NSUN6Q8TEA1 469 aaKnown RBP11.62□□□□□ -0.55
TPM1-225ENST00000560679 EDAQ92838 391 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 RMDN3Q96TC7 470 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 POP1Q99575 1024 aaKnown RBP11.62□□□□□ -0.55
TPM1-225ENST00000560679 RC3H2Q9HBD1 1191 aaKnown RBP11.62□□□□□ -0.55
TPM1-225ENST00000560679 MRVI1Q9Y6F6 885 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 KIAA1671Q9BY89 1806 aa11.62□□□□□ -0.55
TPM1-225ENST00000560679 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 PLXNA3P51805 1871 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 VPS13AQ96RL7 3174 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 TMEM221A6NGB7 291 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 M0R296 226 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 GRM6O15303 877 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 ST18O60284 1047 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 SORBS3O60504 671 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 CTSHP09668 335 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 GOLGA8HP0CJ92 632 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 CTNNB1P35222 781 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 LAMC2Q13753 1193 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 CDC37Q16543 378 aaPredicted RBP11.61□□□□□ -0.55
TPM1-225ENST00000560679 ERICH6BQ5W0A0 696 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 BMP8AQ7Z5Y6 402 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 DHX37Q8IY37 1157 aaKnown RBP11.61□□□□□ -0.55
TPM1-225ENST00000560679 IWS1Q96ST2 819 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 C16orf70Q9BSU1 422 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 IFIH1Q9BYX4 1025 aaKnown RBP11.61□□□□□ -0.55
TPM1-225ENST00000560679 UBA5Q9GZZ9 404 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
TPM1-225ENST00000560679 ABCB11O95342 1321 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 MYH6P13533 1939 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 OPLAHO14841 1288 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 TREHO43280 583 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 CSPG5O95196 566 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 UBA1P22314 1058 aaKnown RBP11.6□□□□□ -0.55
TPM1-225ENST00000560679 CAMK1Q14012 370 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 ALX1Q15699 326 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 MYSM1Q5VVJ2 828 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 TRIM67Q6ZTA4 783 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms