RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FIBPO43427 364 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 B4GALT4O60513 344 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 UBA1P22314 1058 aaKnown RBP14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 FXR1P51114 621 aaKnown RBP eCLIP14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 ANAPC15P60006 121 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 SP4Q02446 784 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 FPGSQ05932 587 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 CELF3Q5SZQ8 465 aaKnown RBP14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 CPLX2Q6PUV4 134 aaKnown RBP14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 TRIM22Q8IYM9 498 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 SLC43A3Q8NBI5 491 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 PPTC7Q8NI37 304 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 PGBD1Q96JS3 809 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 INPP4AQ96PE3 977 aaPredicted RBP14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 GLT8D2Q9H1C3 349 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 ALDH8A1Q9H2A2 487 aaPredicted RBP14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 LTBP2Q14767 1821 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 GRIN2DO15399 1336 aa14.86□□□□□ -0.03
CTDSPL2-209ENST00000560620 TRIOBPQ9H2D6 2365 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 TIMP1P01033 207 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 FOSP01100 380 aaPredicted RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 ZNF286BP0CG31 522 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 IFNAR1P17181 557 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 ITGB8P26012 769 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 EVCP57679 992 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 SP2Q02086 613 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 NEDD9Q14511 834 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 HSDL1Q3SXM5 330 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 MYSM1Q5VVJ2 828 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 CYFIP1Q7L576 1253 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 TMEM199Q8N511 208 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 EMID1Q96A84 441 aaPredicted RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 ALG1Q9BT22 464 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 RNF26Q9BY78 433 aaPredicted RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 HIPK3Q9H422 1215 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 C6orf50Q9HD87 102 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 TRMT13Q9NUP7 481 aaKnown RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 TBX21Q9UL17 535 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 RANBP2P49792 3224 aaKnown RBP14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 NID2Q14112 1375 aa14.85□□□□□ -0.03
CTDSPL2-209ENST00000560620 SPATA31C2B4DYI2 1134 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 SEC24BO95487 1268 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 CD4P01730 458 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 ZNF76P36508 570 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 MTMR1Q13613 665 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 ANKRD1Q15327 319 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 JAKMIP3Q5VZ66 844 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 NFRKBQ6P4R8 1299 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 C7orf31Q8N865 590 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 CDHR1Q96JP9 859 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 KATNAL1Q9BW62 490 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 ANO3Q9BYT9 981 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 TMEM260Q9NX78 707 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 PKD2L1Q9P0L9 805 aa14.84□□□□□ -0.03
CTDSPL2-209ENST00000560620 PPFIA4O75335 1185 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 CYP2C9P11712 490 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 GNA11P29992 359 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 ICAM3P32942 547 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 CYP2C18P33260 490 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 AP3B2Q13367 1082 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 SHHQ15465 462 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 NTRK3Q16288 839 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 PKN1Q16512 942 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 MFSD5Q6N075 450 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 CCDC148Q8NFR7 591 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 GPRASP2Q96D09 838 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 VPS54Q9P1Q0 977 aa14.83□□□□□ -0.04
CTDSPL2-209ENST00000560620 CDKL5O76039 1030 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 CSF2RAP15509 400 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 ITGB5P18084 799 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 PSEN2P49810 448 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 NEK4P51957 841 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 AK2P54819 239 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 CCL23P55773 120 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 NLRP5P59047 1200 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 PTPN11Q06124 597 aaPredicted RBP14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 SEMA3FQ13275 785 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 MFSD10Q14728 455 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 KIAA0753Q2KHM9 967 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 METTL7BQ6UX53 244 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 TEX2Q8IWB9 1127 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 REXO1Q8N1G1 1221 aaKnown RBP14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 BICD2Q8TD16 824 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 BCAS3Q9H6U6 928 aa14.82□□□□□ -0.04
CTDSPL2-209ENST00000560620 DOCK5Q9H7D0 1870 aa14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 PTGISQ16647 500 aa14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 C9orf50Q5SZB4 431 aa14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 UTP14CQ5TAP6 766 aaKnown RBP14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 MCTP2Q6DN12 878 aa14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 KAT2BQ92831 832 aa14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 RNPC3Q96LT9 517 aaKnown RBP14.81□□□□□ -0.04
CTDSPL2-209ENST00000560620 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms