RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 FAM43AQ8N2R8 423 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 SLC5A5Q92911 643 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 GPRASP2Q96D09 838 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 RIT2Q99578 217 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 PTPN18Q99952 460 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 NT5C3AQ9H0P0 336 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 TXNRD2Q9NNW7 524 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 JADE2Q9NQC1 790 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 UBIAD1Q9Y5Z9 338 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 KDM3AQ9Y4C1 1321 aa9.7□□□□□ -0.86
TRAF3-209ENST00000560463 FAM155AB1AL88 458 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-209ENST00000560463 POTEB2H3BUK9 544 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 IPO5O00410 1097 aaKnown RBP9.69□□□□□ -0.86
TRAF3-209ENST00000560463 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
TRAF3-209ENST00000560463 PSMD10O75832 226 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 CAVIN2O95810 425 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 MYL1P05976 194 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 NR3C2P08235 984 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 CCDC192P0DO97 292 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 FCER1AP12319 257 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 MYCLP12524 364 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-209ENST00000560463 UBXN2AP68543 259 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 MRPS9P82933 396 aaKnown RBP9.69□□□□□ -0.86
TRAF3-209ENST00000560463 KCTD2Q14681 263 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 STXBP2Q15833 593 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 E2F4Q16254 413 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 FAM110CQ1W6H9 321 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 HYIQ5T013 277 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 RRAGBQ5VZM2 374 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 HAUS3Q68CZ6 603 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 NLRX1Q86UT6 975 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 ABRAQ8N0Z2 381 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 PDILTQ8N807 584 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 FAM133AQ8N9E0 248 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 RASSF8Q8NHQ8 419 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 CDK5RAP3Q96JB5 506 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 MMP19Q99542 508 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 ZNF577Q9BSK1 485 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 KCNH7Q9NS40 1196 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 KIAA1468Q9P260 1216 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 SERTAD1Q9UHV2 236 aa9.69□□□□□ -0.86
TRAF3-209ENST00000560463 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
TRAF3-209ENST00000560463 DNAJC25-GNG10A0A024R161 153 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 A0A087X0B3 334 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 POTEMA6NI47 508 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 GAS7O60861 476 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 EIF3JO75822 258 aaKnown RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 ITGB5P18084 799 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 MUTP22033 750 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 MAPK4P31152 587 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 STAT6P42226 847 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 TM4SF4P48230 202 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 ALDH5A1P51649 535 aaPredicted RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 SPIRE1Q08AE8 756 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 PPP2R5CQ13362 524 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 MTMR1Q13613 665 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 KARSQ15046 597 aaKnown RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 ZRSR1Q15695 479 aaKnown RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 GNPTABQ3T906 1256 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 LRCH2Q5VUJ6 765 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 PDXDC2PQ6P474 469 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 OTOP1Q7RTM1 612 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 SH3RF1Q7Z6J0 888 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 IFNL1Q8IU54 200 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 ANKRD13CQ8N6S4 541 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 IL31RAQ8NI17 732 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 CYP2W1Q8TAV3 490 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 DHX58Q96C10 678 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 INPP4AQ96PE3 977 aaPredicted RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 FUCA2Q9BTY2 467 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
TRAF3-209ENST00000560463 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 LRRC27Q9C0I9 530 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 TSPY26PQ9H489 355 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 IVNS1ABPQ9Y6Y0 642 aa9.68□□□□□ -0.86
TRAF3-209ENST00000560463 THSD7BQ9C0I4 1608 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 ADGRA2Q96PE1 1338 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 PP2D1A8MPX8 630 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 IGF2BP3O00425 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAF3-209ENST00000560463 PEX10O60683 326 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 SMC2O95347 1197 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 ALDH1A1P00352 501 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 ARP10275 920 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 EDNRBP24530 442 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 YY1P25490 414 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 RPA1P27694 616 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 CDC25AP30304 524 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 AMPD3Q01432 767 aa9.67□□□□□ -0.86
TRAF3-209ENST00000560463 CNTN2Q02246 1040 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms