RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CCSAPQ6IQ19 270 aaPredicted RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 KRT25Q7Z3Z0 450 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 OR6J1Q8NGC5 347 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 CRYGNQ8WXF5 182 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 PAWRQ96IZ0 340 aaKnown RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 NAP1L4Q99733 375 aaKnown RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 JADE2Q9NQC1 790 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 UBIAD1Q9Y5Z9 338 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 ELP1O95163 1332 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 A6NJR5 290 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 PPFIA3O75145 1194 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 CIITAP33076 1130 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 DDIT3P35638 169 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 CEP55Q53EZ4 464 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 GJC2Q5T442 439 aaPredicted RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 JAKMIP3Q5VZ66 844 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 MOXD1Q6UVY6 613 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 GLT1D1Q96MS3 346 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 POLR3EQ9NVU0 708 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 JAK2O60674 1132 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 ACLYP53396 1101 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 NONOQ15233 471 aaKnown RBP eCLIP15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 SAFBQ15424 915 aaKnown RBP eCLIP15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 NPY5RQ15761 445 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 METTL7BQ6UX53 244 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 DHX37Q8IY37 1157 aaKnown RBP15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 PPTC7Q8NI37 304 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 AIFM3Q96NN9 605 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 MXRA8Q9BRK3 442 aa15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
PKNOX1-209ENST00000560448 MEIS1O00470 390 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 CTAGE5O15320 804 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 ARIH2O95376 493 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 MMP1P03956 469 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 ITGB5P18084 799 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 KRT2P35908 639 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 ZNF76P36508 570 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 KCNA10Q16322 511 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 CELF3Q5SZQ8 465 aaKnown RBP15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 LENG1Q96BZ8 264 aaPredicted RBP15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 TMEM260Q9NX78 707 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 RTEL1Q9NZ71 1219 aa15.92■□□□□ 0.14
PKNOX1-209ENST00000560448 MROH7Q68CQ1 1323 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 CCDC194A0A1B0GVG4 234 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 PPFIA4O75335 1185 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 ASGR1P07306 291 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 ARHGAP1Q07960 439 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 SNX17Q15036 470 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 DGKDQ16760 1214 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 LY6KQ17RY6 165 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 MYSM1Q5VVJ2 828 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 DIS3LQ8TF46 1054 aaKnown RBP15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 INTS4Q96HW7 963 aaKnown RBP15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 SENP6Q9GZR1 1112 aaPredicted RBP15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 MLXIPQ9HAP2 919 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 STARD7Q9NQZ5 370 aa15.91■□□□□ 0.14
PKNOX1-209ENST00000560448 NFASCO94856 1347 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 A0A1W2PQ45 241 aaPredicted RBP15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 A0A1W2PQY0 241 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 GGPS1O95749 300 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 HOXD8P13378 290 aaPredicted RBP15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 GCFC2P16383 781 aaKnown RBP15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 CUL4AQ13619 759 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 KRT40Q6A162 431 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 FBXO18Q8NFZ0 1043 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 KATNAL1Q9BW62 490 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 KCNH7Q9NS40 1196 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 KCNJ14Q9UNX9 436 aa15.9■□□□□ 0.14
PKNOX1-209ENST00000560448 NOP56O00567 594 aaKnown RBP15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 MMP3P08254 477 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 SEMA3FQ13275 785 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 SLC39A5Q6ZMH5 540 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 NEK8Q86SG6 692 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 SPRYD3Q8NCJ5 442 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 PGBD1Q96JS3 809 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 SPATA33Q96N06 139 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 MTG1Q9BT17 334 aaPredicted RBP15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 TBC1D22BQ9NU19 505 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 MYH7BA7E2Y1 1941 aa15.89■□□□□ 0.13
PKNOX1-209ENST00000560448 IGLV3-22A0A075B6J6 115 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 CYP3A7-CYP3A51PA0A087WV96 503 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 A0A0U1RQG5 324 aaPredicted RBP15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 MYADML2A6NDP7 307 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 PDIA4P13667 645 aaKnown RBP15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 KCNA2P16389 499 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 CYP3A7P24462 503 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 PURAQ00577 322 aaKnown RBP15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 Q4G0T1 1027 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 PPP4R3AQ6IN85 833 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 POTEDQ86YR6 584 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 DIS3L2Q8IYB7 885 aaKnown RBP15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 RASGRP4Q8TDF6 673 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 AFG1LQ8WV93 481 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms