RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 TMEM169Q96HH4 297 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 ST6GALNAC2Q9UJ37 374 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 COA3Q9Y2R0 106 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-218ENST00000560236 X6R8D5 127 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 ZBTB7CA1YPR0 619 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 C9orf118A6NHY6 69 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 CYP1A1P04798 512 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-218ENST00000560236 ECI1P42126 302 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 KCNAB2Q13303 367 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 SURF1Q15526 300 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 PLEKHH3Q7Z736 793 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 NLRP10Q86W26 655 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 CCDC103Q8IW40 242 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 BTN2A2Q8WVV5 523 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 SSBP3Q9BWW4 388 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-218ENST00000560236 L2HGDHQ9H9P8 463 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 TMEFF2Q9UIK5 374 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-218ENST00000560236 ZNF652Q9Y2D9 606 aa5.71□□□□□ -1.5
LRRC28-218ENST00000560236 CADPSQ9ULU8 1353 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 HGSO14964 777 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-218ENST00000560236 MEFVO15553 781 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-218ENST00000560236 LAMTOR5O43504 91 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 B4GALT3O60512 393 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 FSHBP01225 129 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 SNRPB2P08579 225 aaKnown RBP5.7□□□□□ -1.5
LRRC28-218ENST00000560236 ZNF28P17035 718 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 HOXC12P31275 282 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 ADAM9Q13443 819 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 CHRNA2Q15822 529 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 KISS1RQ969F8 398 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-218ENST00000560236 TOE1Q96GM8 510 aaKnown RBP5.7□□□□□ -1.5
LRRC28-218ENST00000560236 CLIC6Q96NY7 704 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 LRP2BPQ9P2M1 347 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 SRRDQ9UH36 339 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 CEP164Q9UPV0 1460 aa5.7□□□□□ -1.5
LRRC28-218ENST00000560236 ARNTLO00327 626 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 TBX1O43435 398 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 ITGAVP06756 1048 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 IL13P35225 146 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 SV2CQ496J9 727 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 SLC16A11Q8NCK7 471 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 RCBTB1Q8NDN9 531 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 ZSWIM3Q96MP5 696 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 TMEM168Q9H0V1 697 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 INPP5FQ9Y2H2 1132 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 PCDHB4Q9Y5E5 795 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 ARAP1Q96P48 1450 aa5.69□□□□□ -1.5
LRRC28-218ENST00000560236 RSF1Q96T23 1441 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-218ENST00000560236 NPEPPSL1A6NEC2 478 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 CYP7B1O75881 506 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 CPP00450 1065 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 LTBRP36941 435 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 KCNJ6P48051 423 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 ACBD5Q5T8D3 534 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-218ENST00000560236 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 C6orf15Q6UXA7 325 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-218ENST00000560236 ZNF227Q86WZ6 799 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 ARRDC4Q8NCT1 418 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 SH3RF3Q8TEJ3 882 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-218ENST00000560236 CHAMP1Q96JM3 812 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 CCDC140Q96MF4 163 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 ACBD3Q9H3P7 528 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 DTLQ9NZJ0 730 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 PPP4R1LQ9P1A2 415 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 FBXL7Q9UJT9 491 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 PCDHA2Q9Y5H9 948 aa5.68□□□□□ -1.5
LRRC28-218ENST00000560236 TCRBV5S2A0A599 114 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 H7BY64 318 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 SCG5P05408 212 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 LSAMPQ13449 338 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 PRSS53Q2L4Q9 553 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 TEPPQ6URK8 271 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 SPRED1Q7Z699 444 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 FAM178BQ8IXR5 827 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 PPIL6Q8IXY8 311 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 KREMEN2Q8NCW0 462 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 YTHDC1Q96MU7 727 aaKnown RBP5.67□□□□□ -1.5
LRRC28-218ENST00000560236 TGIF2Q9GZN2 237 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 TSC22D4Q9Y3Q8 395 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 CHD1O14646 1710 aa5.67□□□□□ -1.5
LRRC28-218ENST00000560236 SMAD7O15105 426 aaKnown RBP5.66□□□□□ -1.5
LRRC28-218ENST00000560236 DGKIO75912 1065 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 C6P13671 934 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
LRRC28-218ENST00000560236 ICAM4Q14773 271 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 TESK1Q15569 626 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 SF1Q15637 639 aaKnown RBP5.66□□□□□ -1.5
LRRC28-218ENST00000560236 LARP1BQ659C4 914 aaKnown RBP5.66□□□□□ -1.5
LRRC28-218ENST00000560236 CIR1Q86X95 450 aaPredicted RBP5.66□□□□□ -1.5
LRRC28-218ENST00000560236 KBTBD2Q8IY47 623 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 MBD6Q96DN6 1003 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 WRNIP1Q96S55 665 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 TMEM209Q96SK2 561 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 CCSER2Q9H7U1 834 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 JADE2Q9NQC1 790 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 CLDND1Q9NY35 253 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
LRRC28-218ENST00000560236 FTSJ1Q9UET6 329 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms