RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MS4A1P11836 297 aa15.07■□□□□ 0
RABGGTA-213ENST00000560127 SMAD2Q15796 467 aaKnown RBP15.07■□□□□ 0
RABGGTA-213ENST00000560127 KIAA0753Q2KHM9 967 aa15.07■□□□□ 0
RABGGTA-213ENST00000560127 CTC1Q2NKJ3 1217 aa15.07■□□□□ 0
RABGGTA-213ENST00000560127 EMSYQ7Z589 1322 aa15.07■□□□□ 0
RABGGTA-213ENST00000560127 DCHS1Q96JQ0 3298 aa15.07■□□□□ 0
RABGGTA-213ENST00000560127 DOCK5Q9H7D0 1870 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 TTC3P53804 2025 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 ORC4O43929 436 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 ST18O60284 1047 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 PDHBP11177 359 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 TOP1P11387 765 aaKnown RBP15.06■□□□□ 0
RABGGTA-213ENST00000560127 DLX2Q07687 328 aaPredicted RBP15.06■□□□□ 0
RABGGTA-213ENST00000560127 CLUL1Q15846 466 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 PLEKHG4Q58EX7 1191 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 ZMYM1Q5SVZ6 1142 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 FBXO11Q86XK2 927 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 RNF135Q8IUD6 432 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 RGS22Q8NE09 1264 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 TBC1D5Q92609 795 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 TOP1MTQ969P6 601 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 EMID1Q96A84 441 aaPredicted RBP15.06■□□□□ 0
RABGGTA-213ENST00000560127 TAAR1Q96RJ0 339 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 YME1L1Q96TA2 773 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 KATNAL1Q9BW62 490 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 DDX41Q9UJV9 622 aaKnown RBP15.06■□□□□ 0
RABGGTA-213ENST00000560127 KIAA1671Q9BY89 1806 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 PLXNA3P51805 1871 aa15.06■□□□□ 0
RABGGTA-213ENST00000560127 MYO10Q9HD67 2058 aa15.05■□□□□ 0
RABGGTA-213ENST00000560127 RSPH10B2B2RC85 870 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 MBTPS2O43462 519 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 NCK2O43639 380 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 FGRP09769 529 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 RSPH10BP0C881 870 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 THPOP40225 353 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 PTPN5P54829 565 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 USH1GQ495M9 461 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 BMP8AQ7Z5Y6 402 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 EDAQ92838 391 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 GPATCH3Q96I76 525 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 COL20A1Q9P218 1284 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 ANAPC4Q9UJX5 808 aa15.05■□□□□ -0
RABGGTA-213ENST00000560127 GVINP1Q7Z2Y8 2422 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.04■□□□□ -0
RABGGTA-213ENST00000560127 UPP2O95045 317 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 ZNF543Q08ER8 600 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 HYAL1Q12794 435 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 TCF15Q12870 199 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 SERINC5Q86VE9 423 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 PPTC7Q8NI37 304 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 SYTL5Q8TDW5 730 aaPredicted RBP15.04■□□□□ -0
RABGGTA-213ENST00000560127 NSUN6Q8TEA1 469 aaKnown RBP15.04■□□□□ -0
RABGGTA-213ENST00000560127 POP1Q99575 1024 aaKnown RBP15.04■□□□□ -0
RABGGTA-213ENST00000560127 OSBPL7Q9BZF2 842 aa15.04■□□□□ -0
RABGGTA-213ENST00000560127 LINC00271P0C7V0 271 aa15.03■□□□□ -0
RABGGTA-213ENST00000560127 HOXD8P13378 290 aaPredicted RBP15.03■□□□□ -0
RABGGTA-213ENST00000560127 SMAD4Q13485 552 aaKnown RBP15.03■□□□□ -0
RABGGTA-213ENST00000560127 LAMC2Q13753 1193 aa15.03■□□□□ -0
RABGGTA-213ENST00000560127 STXBP2Q15833 593 aa15.03■□□□□ -0
RABGGTA-213ENST00000560127 DHX37Q8IY37 1157 aaKnown RBP15.03■□□□□ -0
RABGGTA-213ENST00000560127 IWS1Q96ST2 819 aa15.03■□□□□ -0
RABGGTA-213ENST00000560127 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
RABGGTA-213ENST00000560127 LOXHD1Q8IVV2 1947 aa15.03■□□□□ -0
RABGGTA-213ENST00000560127 BAZ2BQ9UIF8 2168 aaKnown RBP15.02■□□□□ -0
RABGGTA-213ENST00000560127 TMEM221A6NGB7 291 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 C5orf67F2Z3F1 127 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 M0R296 226 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 STXBP3O00186 592 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 GRM6O15303 877 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 TBX10O75333 385 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 SNHG28P0DPA3 235 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -0
RABGGTA-213ENST00000560127 VPS53Q5VIR6 699 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 TRIM67Q6ZTA4 783 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 SEPT8Q92599 483 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 PBXIP1Q96AQ6 731 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 RMDN3Q96TC7 470 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 FSD1Q9BTV5 496 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 CPVLQ9H3G5 476 aa15.02■□□□□ -0
RABGGTA-213ENST00000560127 ALG13Q9NP73 1137 aaKnown RBP15.02■□□□□ -0
RABGGTA-213ENST00000560127 EIF3JO75822 258 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 CTNNB1P35222 781 aa15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 RRP12Q5JTH9 1297 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 PRRX2Q99811 253 aa15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 IFIH1Q9BYX4 1025 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 MAF1Q9H063 256 aa15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 TOMM22Q9NS69 142 aa15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 MRVI1Q9Y6F6 885 aa15.01□□□□□ -0.01
RABGGTA-213ENST00000560127 ABCB11O95342 1321 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 LINC01565O15544 149 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 PPFIA4O75335 1185 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 RB1P06400 928 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 GOLGA8HP0CJ92 632 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 EIF2AK2P19525 551 aaKnown RBP15□□□□□ -0.01
RABGGTA-213ENST00000560127 HOXC8P31273 242 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 PKN1Q16512 942 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 HSDL1Q3SXM5 330 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 PI4K2BQ8TCG2 481 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 ATP6V0A1Q93050 837 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms