RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 BMP8BP34820 402 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 AK2P54819 239 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 ANAPC15P60006 121 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 NBPF20Q3BBV1 942 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 HSDL1Q3SXM5 330 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 CELF3Q5SZQ8 465 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 JAKMIP3Q5VZ66 844 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 INPP4AQ96PE3 977 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 TBX21Q9UL17 535 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 UMODL1Q5DID0 1318 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 SPATA31C2B4DYI2 1134 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 CD4P01730 458 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 IFNAR1P17181 557 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 FXR1P51114 621 aaKnown RBP eCLIP17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 EPHB4P54760 987 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 LAMC2Q13753 1193 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 KAT2BQ92831 832 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 MLXIPQ9HAP2 919 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 VPS54Q9P1Q0 977 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
RABGGTA-211ENST00000559850 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 SOX1O00570 391 aaPredicted RBP17■□□□□ 0.31
RABGGTA-211ENST00000559850 FIBPO43427 364 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 ITGB5P18084 799 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 ICAM3P32942 547 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 SP4Q02446 784 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 SCRN1Q12765 414 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 KCNV1Q6PIU1 500 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
RABGGTA-211ENST00000559850 PPTC7Q8NI37 304 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 EMID1Q96A84 441 aaPredicted RBP17■□□□□ 0.31
RABGGTA-211ENST00000559850 ALG1Q9BT22 464 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
RABGGTA-211ENST00000559850 ANO3Q9BYT9 981 aa17■□□□□ 0.31
RABGGTA-211ENST00000559850 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
RABGGTA-211ENST00000559850 SCN5AQ14524 2016 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 TRIP12Q14669 1992 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 CPLX1O14810 134 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 KPNA6O60684 536 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 ATP9AO75110 1047 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 STAM2O75886 525 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 LARGE1O95461 756 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 CYP2C9P11712 490 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 CYP2C18P33260 490 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 CLK2P49760 499 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 DGKDQ16760 1214 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 C9orf50Q5SZB4 431 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 NLRX1Q86UT6 975 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 TDHQ8IZJ6 230 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 NECAB1Q8N987 351 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 CYP2W1Q8TAV3 490 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 AIFM3Q96NN9 605 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 UBIAD1Q9Y5Z9 338 aa16.99■□□□□ 0.31
RABGGTA-211ENST00000559850 TIMP1P01033 207 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 TGFB3P10600 412 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 PSEN2P49810 448 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 NEK4P51957 841 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 SSRP1Q08945 709 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 SHHQ15465 462 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 XRRA1Q6P2D8 792 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 LRCH3Q96II8 777 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 UIMC1Q96RL1 719 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 ZMYND12Q9H0C1 365 aa16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 SLKQ9H2G2 1235 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-211ENST00000559850 KCNA2P16389 499 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 CCL23P55773 120 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 FPGSQ05932 587 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 MTMR1Q13613 665 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 MFSD10Q14728 455 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 TRIM22Q8IYM9 498 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 C6orf50Q9HD87 102 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 JADE2Q9NQC1 790 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
RABGGTA-211ENST00000559850 RANBP2P49792 3224 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 A0A1W2PPC1 479 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 ESYT2A0FGR8 921 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 NOP56O00567 594 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 PFKFB2O60825 505 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 F2P00734 622 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 ARP10275 920 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 CSF2RAP15509 400 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 NEDD9Q14511 834 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 ME3Q16798 604 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 KIAA0753Q2KHM9 967 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 GDF6Q6KF10 455 aaPredicted RBP16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms