RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ALG1Q9BT22 464 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 TRMT13Q9NUP7 481 aaKnown RBP9.4□□□□□ -0.9
SNX1-207ENST00000559401 UMODL1Q5DID0 1318 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 TANC1Q9C0D5 1861 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 SMCO2A6NFE2 343 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 STXBP3O00186 592 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 FIBPO43427 364 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 TGFB3P10600 412 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 CYP2C9P11712 490 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 SCG2P13521 617 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 CSF2RAP15509 400 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PSEN2P49810 448 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 EPHB4P54760 987 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 CCL23P55773 120 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 FUT2Q10981 343 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 STK3Q13188 491 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 NEDD9Q14511 834 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 HSDL1Q3SXM5 330 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 LRIT3Q3SXY7 679 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 CELF3Q5SZQ8 465 aaKnown RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 MYSM1Q5VVJ2 828 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 NFRKBQ6P4R8 1299 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PPTC7Q8NI37 304 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PHKBQ93100 1093 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 EMID1Q96A84 441 aaPredicted RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 INPP4AQ96PE3 977 aaPredicted RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 NOC4LQ9BVI4 516 aaKnown RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 KATNAL1Q9BW62 490 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 SLC26A6Q9BXS9 759 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 ZSWIM6Q9HCJ5 1215 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 RIC8AQ9NPQ8 531 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 FAM217BQ9NTX9 383 aaPredicted RBP9.39□□□□□ -0.91
SNX1-207ENST00000559401 PDRG1Q9NUG6 133 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 BARHL2Q9NY43 387 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PCDHA6Q9UN73 950 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 PCDHA8Q9Y5H6 950 aa9.39□□□□□ -0.91
SNX1-207ENST00000559401 NID2Q14112 1375 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 CPLX1O14810 134 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 ACRP10323 421 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 PDIA3P30101 505 aaKnown RBP9.38□□□□□ -0.91
SNX1-207ENST00000559401 SP2Q02086 613 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 PTPN11Q06124 597 aaPredicted RBP9.38□□□□□ -0.91
SNX1-207ENST00000559401 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
SNX1-207ENST00000559401 MFSD10Q14728 455 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 PFKFB3Q16875 520 aaPredicted RBP9.38□□□□□ -0.91
SNX1-207ENST00000559401 KIAA0753Q2KHM9 967 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 CYFIP1Q7L576 1253 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 C7orf31Q8N865 590 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
SNX1-207ENST00000559401 SCLYQ96I15 445 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 ANO3Q9BYT9 981 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 AGXT2Q9BYV1 514 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 TM6SF1Q9BZW5 370 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 GLT8D2Q9H1C3 349 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 TMEM260Q9NX78 707 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 SCN5AQ14524 2016 aa9.38□□□□□ -0.91
SNX1-207ENST00000559401 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 EIF5BO60841 1220 aaKnown RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 PPFIA4O75335 1185 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 F2P00734 622 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 FOSP01100 380 aaPredicted RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 ICAM3P32942 547 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 ZNF76P36508 570 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 SEMA3FQ13275 785 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 MTMR1Q13613 665 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 PTGISQ16647 500 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 UTP14CQ5TAP6 766 aaKnown RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 JAKMIP3Q5VZ66 844 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 PSRC1Q6PGN9 363 aaPredicted RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 CPLX2Q6PUV4 134 aaKnown RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 METTL7BQ6UX53 244 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 ZNF365Q70YC5 407 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 Q7L0L9 218 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 CCDC148Q8NFR7 591 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 KAT2BQ92831 832 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 GPRASP2Q96D09 838 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 CDHR1Q96JP9 859 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.37□□□□□ -0.919e-14■■□□□ 12
SNX1-207ENST00000559401 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 MTIF3Q9H2K0 278 aaKnown RBP9.37□□□□□ -0.91
SNX1-207ENST00000559401 BCAS3Q9H6U6 928 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 C6orf50Q9HD87 102 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 IL23AQ9NPF7 189 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 HDAC6Q9UBN7 1215 aa9.37□□□□□ -0.91
SNX1-207ENST00000559401 DNAH12Q6ZR08 3092 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
SNX1-207ENST00000559401 LGALS2P05162 132 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 IFNAR1P17181 557 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 ITGB5P18084 799 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms