RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 EDIL3O43854 480 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 EVI5O60447 810 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 GGPS1O95749 300 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 MYL3P08590 195 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 SREBF1P36956 1147 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 AP3B2Q13367 1082 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 REXO1Q8N1G1 1221 aaKnown RBP21.4■■□□□ 1.02
CASC4-209ENST00000559222 PCSK9Q8NBP7 692 aaKnown RBP21.4■■□□□ 1.02
CASC4-209ENST00000559222 CCDC12Q8WUD4 166 aaPredicted RBP21.4■■□□□ 1.02
CASC4-209ENST00000559222 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 STARD7Q9NQZ5 370 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 PKD2L1Q9P0L9 805 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 ZMYND8Q9ULU4 1186 aaPredicted RBP21.4■■□□□ 1.02
CASC4-209ENST00000559222 ATP11BQ9Y2G3 1177 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 ATP9AO75110 1047 aa21.39■■□□□ 1.01
CASC4-209ENST00000559222 MMP3P08254 477 aa21.39■■□□□ 1.01
CASC4-209ENST00000559222 ICAM3P32942 547 aa21.39■■□□□ 1.01
CASC4-209ENST00000559222 PURAQ00577 322 aaKnown RBP21.39■■□□□ 1.01
CASC4-209ENST00000559222 CELF3Q5SZQ8 465 aaKnown RBP21.39■■□□□ 1.01
CASC4-209ENST00000559222 ALG1Q9BT22 464 aa21.39■■□□□ 1.01
CASC4-209ENST00000559222 A6NJR5 290 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 M0R2N6 131 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 FIBPO43427 364 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 FOSP01100 380 aaPredicted RBP21.38■■□□□ 1.01
CASC4-209ENST00000559222 SYN1P17600 705 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 ARHGAP4P98171 946 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 HSDL1Q3SXM5 330 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 MYSM1Q5VVJ2 828 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 XRRA1Q6P2D8 792 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 OXER1Q8TDS5 423 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 UIMC1Q96RL1 719 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 PHF20Q9BVI0 1012 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 GLT8D2Q9H1C3 349 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 PCDHA4Q9UN74 947 aa21.38■■□□□ 1.01
CASC4-209ENST00000559222 STAM2O75886 525 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 ARP10275 920 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 KCNA2P16389 499 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 GNA11P29992 359 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 CPT1AP50416 773 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 DHX37Q8IY37 1157 aaKnown RBP21.37■■□□□ 1.01
CASC4-209ENST00000559222 GLT1D1Q96MS3 346 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 EHMT1Q9H9B1 1298 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 JADE2Q9NQC1 790 aa21.37■■□□□ 1.01
CASC4-209ENST00000559222 FAM86B1E9PN63 330 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 FAM86B2P0C5J1 330 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 ZNF286BP0CG31 522 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 TLE2Q04725 743 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 GNPTABQ3T906 1256 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 PRPF38BQ5VTL8 546 aaKnown RBP21.36■■□□□ 1.01
CASC4-209ENST00000559222 CYFIP1Q7L576 1253 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 SH3RF1Q7Z6J0 888 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 BLIDQ8IZY5 108 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 DAGLBQ8NCG7 672 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 EMID1Q96A84 441 aaPredicted RBP21.36■■□□□ 1.01
CASC4-209ENST00000559222 VTI1AQ96AJ9 217 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 GPRASP2Q96D09 838 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 MXRA8Q9BRK3 442 aa21.36■■□□□ 1.01
CASC4-209ENST00000559222 ELP1O95163 1332 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 FAM205CA6NFA0 338 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 PQBP1O60828 265 aaKnown RBP21.35■■□□□ 1.01
CASC4-209ENST00000559222 CDK7P50613 346 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 SP4Q02446 784 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 MTMR1Q13613 665 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 KCNV1Q6PIU1 500 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 NLRX1Q86UT6 975 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 TEX2Q8IWB9 1127 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 KAT2BQ92831 832 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 ZSCAN31Q96LW9 406 aaPredicted RBP21.35■■□□□ 1.01
CASC4-209ENST00000559222 SPATA33Q96N06 139 aa21.35■■□□□ 1.01
CASC4-209ENST00000559222 IGLV3-22A0A075B6J6 115 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 A0A0U1RQG5 324 aaPredicted RBP21.34■■□□□ 1.01
CASC4-209ENST00000559222 ST18O60284 1047 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 ZEB2O60315 1214 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 TGFB3P10600 412 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 LAMC2Q13753 1193 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 EARS2Q5JPH6 523 aaKnown RBP21.34■■□□□ 1.01
CASC4-209ENST00000559222 C1orf53Q5VUE5 145 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 SLC43A3Q8NBI5 491 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 PPTC7Q8NI37 304 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 BICD2Q8TD16 824 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 MTG1Q9BT17 334 aaPredicted RBP21.34■■□□□ 1.01
CASC4-209ENST00000559222 PDLIM7Q9NR12 457 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 SH2B1Q9NRF2 756 aaPredicted RBP21.34■■□□□ 1.01
CASC4-209ENST00000559222 POLR3EQ9NVU0 708 aa21.34■■□□□ 1.01
CASC4-209ENST00000559222 RBAK-RBAKDNI3L0D1 243 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 ARVCFO00192 962 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 CYP3A4P08684 503 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 GUCY1B3Q02153 619 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 ITGB3BPQ13352 177 aaPredicted RBP21.33■■□□□ 1.01
CASC4-209ENST00000559222 ITGA7Q13683 1181 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 CEP55Q53EZ4 464 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 TBCKQ8TEA7 893 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 MLXIPQ9HAP2 919 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 KCNH7Q9NS40 1196 aa21.33■■□□□ 1.01
CASC4-209ENST00000559222 TRIM43BA6NCK2 446 aa21.32■■□□□ 1
CASC4-209ENST00000559222 MEIS1O00470 390 aa21.32■■□□□ 1
CASC4-209ENST00000559222 HOXD8P13378 290 aaPredicted RBP21.32■■□□□ 1
CASC4-209ENST00000559222 CHMP4BP1P59074 171 aa21.32■■□□□ 1
CASC4-209ENST00000559222 NR5A1Q13285 461 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms