RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MXRA8Q9BRK3 442 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 GLT8D2Q9H1C3 349 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
TPM1-217ENST00000559108 JADE2Q9NQC1 790 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 OGDHLQ9ULD0 1010 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 TXNP10599 105 aaKnown RBP12.42□□□□□ -0.42
TPM1-217ENST00000559108 U2AF2P26368 475 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■■■□ 22.6
TPM1-217ENST00000559108 BEX3Q00994 111 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM1-217ENST00000559108 CEP55Q53EZ4 464 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
TPM1-217ENST00000559108 UBE2Q1Q7Z7E8 422 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 KLHDC9Q8NEP7 349 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 KCNH7Q9NS40 1196 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 MRVI1Q9Y6F6 885 aa12.42□□□□□ -0.42
TPM1-217ENST00000559108 SCN10AQ9Y5Y9 1956 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 CCDC85CA6NKD9 419 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 DHX15O43143 795 aaKnown RBP12.41□□□□□ -0.42
TPM1-217ENST00000559108 FIBPO43427 364 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 DUSP11O75319 330 aaKnown RBP12.41□□□□□ -0.42
TPM1-217ENST00000559108 XBP1P17861 261 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 CYP3A7P24462 503 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 GJA9P57773 515 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 NKX3-2P78367 333 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 RESTQ13127 1097 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 TRIM29Q14134 588 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 LRRC41Q15345 812 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 IQSEC1Q6DN90 963 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 XRRA1Q6P2D8 792 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 FERMT3Q86UX7 667 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 NOSTRINQ8IVI9 506 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
TPM1-217ENST00000559108 PCDH10Q9P2E7 1040 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 ZDHHC9Q9Y397 364 aa12.41□□□□□ -0.42
TPM1-217ENST00000559108 MSH4O15457 936 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 FARP2O94887 1054 aaPredicted RBP12.4□□□□□ -0.42
TPM1-217ENST00000559108 GGPS1O95749 300 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 CCNE2O96020 404 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 RARBP10826 455 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 DDIT3P35638 169 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 MTMR1Q13613 665 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 TTLL4Q14679 1199 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 LETM2Q2VYF4 491 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 HSDL1Q3SXM5 330 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 PRR16Q569H4 304 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 NEK8Q86SG6 692 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 AFG1LQ8WV93 481 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 HAS1Q92839 578 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 TMEM60Q9H2L4 133 aa12.4□□□□□ -0.42
TPM1-217ENST00000559108 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
TPM1-217ENST00000559108 VPS37CA5D8V6 355 aaPredicted RBP12.39□□□□□ -0.43
TPM1-217ENST00000559108 B4DLN1 442 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 DYNC1LI2O43237 492 aaPredicted RBP12.39□□□□□ -0.43
TPM1-217ENST00000559108 STAM2O75886 525 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 MMP3P08254 477 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 COL6A1P12109 1028 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 USP11P51784 963 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 CELF3Q5SZQ8 465 aaKnown RBP12.39□□□□□ -0.43
TPM1-217ENST00000559108 CYFIP1Q7L576 1253 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
TPM1-217ENST00000559108 MPHOSPH6Q99547 160 aaKnown RBP12.39□□□□□ -0.43
TPM1-217ENST00000559108 FTOQ9C0B1 505 aaKnown RBP eCLIP12.39□□□□□ -0.43
TPM1-217ENST00000559108 EHMT1Q9H9B1 1298 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
TPM1-217ENST00000559108 GRIN2DO15399 1336 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 MKI67P46013 3256 aaKnown RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 GSTTP1A0A1W2PQM5 241 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 STX6O43752 255 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 MSCO60682 206 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 GH1P01241 217 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 C6orf222P0C671 652 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 HOXD8P13378 290 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 ATP2B1P20020 1258 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 CST5P28325 142 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 SP4Q02446 784 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 GNPTABQ3T906 1256 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 Q4G0T1 1027 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 MCTP2Q6DN12 878 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms