RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 FOXP1Q9H334 677 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 TTC12Q9H892 705 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 RIC8AQ9NPQ8 531 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 MTMR7Q9Y216 660 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 DIS3Q9Y2L1 958 aaKnown RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 MORC2Q9Y6X9 1032 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 LCTP09848 1927 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 ASTN1O14525 1302 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 CEP290O15078 2479 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 LRRC37A2A6NM11 1700 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 PDE4DIPQ5VU43 2346 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 SMTNL1A8MU46 457 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 M0R2N6 131 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 AP5Z1O43299 807 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 NEMFO60524 1076 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 STAM2O75886 525 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 PGK2P07205 417 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 U2AF2P26368 475 aaKnown RBP eCLIP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 TRAPPC10P48553 1259 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 ADCY7P51828 1080 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 NAPAP54920 295 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 CACNB2Q08289 660 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 DHX8Q14562 1220 aaKnown RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 PLS1Q14651 629 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 NOLC1Q14978 699 aaKnown RBP eCLIP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 IQCB1Q15051 598 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 OLFML2BQ68BL8 750 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 XRRA1Q6P2D8 792 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 MOXD1Q6UVY6 613 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 HEATR3Q7Z4Q2 680 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 NCAPG2Q86XI2 1143 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 HOMER1Q86YM7 354 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 NOSTRINQ8IVI9 506 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 DIS3L2Q8IYB7 885 aaKnown RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 FAM133AQ8N9E0 248 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 RAET1EQ8TD07 263 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 TBC1D5Q92609 795 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 CCDC34Q96HJ3 373 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 MRFAP1L1Q96HT8 127 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 MPHOSPH6Q99547 160 aaKnown RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 NAP1L4Q99733 375 aaKnown RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 BPIFA3Q9BQP9 254 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 EHMT1Q9H9B1 1298 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 PAK6Q9NQU5 681 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-211ENST00000558890 GJB4Q9NTQ9 266 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 PCDHA4Q9UN74 947 aa8.68□□□□□ -1.02
LRRC28-211ENST00000558890 POTEFA5A3E0 1075 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 B4DLN1 442 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 NFIBO00712 420 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 ZNF202O95125 648 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 SNAI1O95863 264 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 BMP15O95972 392 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 INHAP05111 366 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 FCER1AP12319 257 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 PTGS1P23219 599 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 MARCKSP29966 332 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 RGS2P41220 211 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 NLRP12P59046 1061 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 CNTN2Q02246 1040 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 PTPAQ15257 358 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 NPY5RQ15761 445 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 SLC9C1Q4G0N8 1177 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 LHX8Q68G74 356 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 CCDC174Q6PII3 467 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 MAMDC4Q6UXC1 1216 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 KRT25Q7Z3Z0 450 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 UBE2Q1Q7Z7E8 422 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 TRMT44Q8IYL2 757 aaKnown RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 AOPEPQ8N6M6 819 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 MORC4Q8TE76 937 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 MAML3Q96JK9 1138 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 ZNF830Q96NB3 372 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 APBA2Q99767 749 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 KATNBL1Q9H079 304 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 UNC93B1Q9H1C4 597 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 PSTPIP2Q9H939 334 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 A1CFQ9NQ94 594 aaKnown RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 RNF146Q9NTX7 359 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 SPTLC3Q9NUV7 552 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 SLC5A4Q9NY91 659 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 CYP39A1Q9NYL5 469 aa8.67□□□□□ -1.02
LRRC28-211ENST00000558890 ADD3Q9UEY8 706 aaKnown RBP8.67□□□□□ -1.02
LRRC28-211ENST00000558890 DNAH12Q6ZR08 3092 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 RPTORQ8N122 1335 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 UQCRHLA0A096LP55 91 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 FAM237AA0A1B0GTK4 181 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 SMCO2A6NFE2 343 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 NRDCO43847 1150 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms