RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
SEMA4B-205ENST00000558848 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 IFIT3O14879 490 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 IGFBP4P22692 258 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 ICAM3P32942 547 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 WDR5P61964 334 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 MFSD10Q14728 455 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 C7orf31Q8N865 590 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 WNT8BQ93098 351 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
SEMA4B-205ENST00000558848 MYO9BQ13459 2157 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 GCOM1H8Y6P7 765 aaPredicted RBP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 POLR2MP0CAP2 368 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 ZNF286BP0CG31 522 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 CNKSR3Q6P9H4 555 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 PPM1EQ8WY54 764 aa13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 FTOQ9C0B1 505 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEMA4B-205ENST00000558848 ABHD14A-ACY1A0A1B0GW23 586 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 TNFRSF10AO00220 468 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 LPXNO60711 386 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 STAM2O75886 525 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 GGPS1O95749 300 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 MYCLP12524 364 aaPredicted RBP13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 CCND2P30279 289 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 WTAPQ15007 396 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 SERINC5Q86VE9 423 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
SEMA4B-205ENST00000558848 MYH6P13533 1939 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 ERICH2A1L162 156 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 RFXAPO00287 272 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 BMP1P13497 986 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 DEFB103AP81534 67 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 ZNF618Q5T7W0 954 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 SPRED2Q7Z698 418 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 BDP1A6H8Y1 2624 aa13.66□□□□□ -0.22
SEMA4B-205ENST00000558848 PTPRSQ13332 1948 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 MEIS2O14770 477 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 TLL1O43897 1013 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 EFCAB14O75071 495 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 DDAH1O94760 285 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 GJB5O95377 273 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 ADAM17P78536 824 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 TRIP12Q14669 1992 aaPredicted RBP13.65□□□□□ -0.22
SEMA4B-205ENST00000558848 PRRC2BQ5JSZ5 2229 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 H3BRB1 525 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 LGALS2P05162 132 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 KCNJ6P48051 423 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 GRB10Q13322 594 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 XRRA1Q6P2D8 792 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 RAD9AQ99638 391 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 GPR20Q99678 358 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 LSG1Q9H089 658 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 TUT1Q9H6E5 874 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 CERS4Q9HA82 394 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 LMCD1Q9NZU5 365 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 NCOR1O75376 2440 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
SEMA4B-205ENST00000558848 RBAK-RBAKDNI3L0D1 243 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 FIBPO43427 364 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 LGR5O75473 907 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms