RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 HAUS4Q9H6D7 363 aa9.27□□□□□ -0.93
SPG11-209ENST00000558253 TAB2Q9NYJ8 693 aa9.27□□□□□ -0.93
SPG11-209ENST00000558253 FAM198AQ9UFP1 575 aa9.27□□□□□ -0.93
SPG11-209ENST00000558253 DDX25Q9UHL0 483 aaKnown RBP9.27□□□□□ -0.93
SPG11-209ENST00000558253 EPN1Q9Y6I3 576 aaPredicted RBP9.27□□□□□ -0.93
SPG11-209ENST00000558253 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 MMP10P09238 476 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 MCM3P25205 808 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 HNRNPH3P31942 346 aaKnown RBP9.26□□□□□ -0.93
SPG11-209ENST00000558253 SLC1A4P43007 532 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 MTIF2P46199 727 aaKnown RBP9.26□□□□□ -0.93
SPG11-209ENST00000558253 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
SPG11-209ENST00000558253 GABPB1Q06547 395 aaPredicted RBP9.26□□□□□ -0.93
SPG11-209ENST00000558253 TBC1D8BQ0IIM8 1120 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 GRB10Q13322 594 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 ELF2Q15723 593 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 CCDC96Q2M329 555 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 DACT2Q5SW24 774 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 HAUS3Q68CZ6 603 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 SLFN13Q68D06 897 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 TMCO3Q6UWJ1 677 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 BTNL9Q6UXG8 535 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 RAD9BQ6WBX8 426 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 CCDC65Q8IXS2 484 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 KRT222Q8N1A0 295 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 CPLX3Q8WVH0 158 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 RPGRIP1Q96KN7 1286 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 FAM20AQ96MK3 541 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 AMNQ9BXJ7 453 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 DDX4Q9NQI0 724 aaKnown RBP9.26□□□□□ -0.93
SPG11-209ENST00000558253 FAM53CQ9NYF3 392 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 HERC5Q9UII4 1024 aaKnown RBP9.26□□□□□ -0.93
SPG11-209ENST00000558253 CDC23Q9UJX2 597 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 PCDHA12Q9UN75 941 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 MTMR7Q9Y216 660 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 FRMPD2Q68DX3 1309 aaPredicted RBP9.26□□□□□ -0.93
SPG11-209ENST00000558253 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
SPG11-209ENST00000558253 ATRNL1Q5VV63 1379 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 MYH1P12882 1939 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 PP2D1A8MPX8 630 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 EIF3CLB5ME19 914 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 KRT86O43790 486 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 NDUFA10O95299 355 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 MUTP22033 750 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 CDC25AP30304 524 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 TNNI2P48788 182 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 PPP2R3AQ06190 1150 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 HIC1Q14526 733 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 BRD3Q15059 726 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 MAN2A1Q16706 1144 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 ERCC6LQ2NKX8 1250 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 Q4G0T1 1027 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 VWA3BQ502W6 1294 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 RSRC2Q7L4I2 434 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 SRGAP1Q7Z6B7 1085 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 LRRC47Q8N1G4 583 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 MSL3Q8N5Y2 521 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 SYN2Q92777 582 aaPredicted RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 COA7Q96BR5 231 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 WDR24Q96S15 920 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 EIF3CQ99613 913 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 NAPGQ99747 312 aaPredicted RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
SPG11-209ENST00000558253 GBP3Q9H0R5 595 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 EHMT1Q9H9B1 1298 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 BLOC1S4Q9NUP1 217 aa9.25□□□□□ -0.93
SPG11-209ENST00000558253 CDK5RAP2Q96SN8 1893 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 TTC26A0AVF1 554 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 F8W031 263 aaPredicted RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 PIK3CDO00329 1044 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 PSMD14O00487 310 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 GPR37O15354 613 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 PLA2G6O60733 806 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 APBA3O96018 575 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 EEF2P13639 858 aaKnown RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 TRIM21P19474 475 aaKnown RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 CIITAP33076 1130 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 FKBP3Q00688 224 aaKnown RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 EHHADHQ08426 723 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 GOLGA8FQ08AF8 430 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 GOLGA8DPQ0D2H9 430 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 STK4Q13043 487 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 ABCB5Q2M3G0 1257 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 ZNF569Q5MCW4 686 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 FKBP1CQ5VVH2 108 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 FBXO38Q6PIJ6 1188 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 MYOCDQ8IZQ8 938 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 HNRNPLLQ8WVV9 542 aaKnown RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.93
SPG11-209ENST00000558253 CNOT6LQ96LI5 555 aaKnown RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 PNMA5Q96PV4 448 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms