RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZNF577Q9BSK1 485 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 TNPO2O14787 897 aaKnown RBP19.03■□□□□ 0.64
SNX1-203ENST00000558040 FCGRTP55899 365 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 FAM160A1Q05DH4 1040 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 IGSF22Q8N9C0 903 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 SLC5A5Q92911 643 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
SNX1-203ENST00000558040 ZFP91Q96JP5 570 aaPredicted RBP19.03■□□□□ 0.64
SNX1-203ENST00000558040 FGD4Q96M96 766 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 WDR11Q9BZH6 1224 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 KCNH7Q9NS40 1196 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 RNF186Q9NXI6 227 aa19.03■□□□□ 0.64
SNX1-203ENST00000558040 ZNFX1Q9P2E3 1918 aaKnown RBP19.02■□□□□ 0.64
SNX1-203ENST00000558040 FAM237AA0A1B0GTK4 181 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 A0A1B0GVL5 298 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 IPO5O00410 1097 aaKnown RBP19.02■□□□□ 0.64
SNX1-203ENST00000558040 COBLO75128 1261 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 TBC1D8O95759 1140 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 ARP10275 920 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 PFKFB1P16118 471 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 KIF22Q14807 665 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 SPECC1Q5M775 1068 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 MORN1Q5T089 497 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 LRCH2Q5VUJ6 765 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 MORC4Q8TE76 937 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 SYMPKQ92797 1274 aaKnown RBP19.02■□□□□ 0.64
SNX1-203ENST00000558040 RIT2Q99578 217 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 NUDT12Q9BQG2 462 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 PYM1Q9BRP8 204 aaKnown RBP19.02■□□□□ 0.64
SNX1-203ENST00000558040 GOLPH3LQ9H4A5 285 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 AGO4Q9HCK5 861 aaKnown RBP19.02■□□□□ 0.64
SNX1-203ENST00000558040 LRWD1Q9UFC0 647 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 TCEAL9Q9UHQ7 104 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 STK24Q9Y6E0 443 aa19.02■□□□□ 0.64
SNX1-203ENST00000558040 GAS7O60861 476 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 TRPA1O75762 1119 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 LIG1P18858 919 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 UBA7P41226 1012 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 C1QTNF8P60827 252 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 LACTBP83111 547 aaPredicted RBP19.01■□□□□ 0.63
SNX1-203ENST00000558040 MAP2K5Q13163 448 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 MSL3Q8N5Y2 521 aaKnown RBP19.01■□□□□ 0.63
SNX1-203ENST00000558040 TEKT3Q9BXF9 490 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 TBC1D22BQ9NU19 505 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 DDX19AQ9NUU7 478 aaKnown RBP19.01■□□□□ 0.63
SNX1-203ENST00000558040 SAGE1Q9NXZ1 904 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 KCNH3Q9ULD8 1083 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 HPSEQ9Y251 543 aa19.01■□□□□ 0.63
SNX1-203ENST00000558040 KINO60870 393 aaKnown RBP19■□□□□ 0.63
SNX1-203ENST00000558040 ICAM3P32942 547 aa19■□□□□ 0.63
SNX1-203ENST00000558040 RGS2P41220 211 aa19■□□□□ 0.63
SNX1-203ENST00000558040 SYKP43405 635 aa19■□□□□ 0.63
SNX1-203ENST00000558040 NDUFA8P51970 172 aa19■□□□□ 0.63
SNX1-203ENST00000558040 SP3Q02447 781 aa19■□□□□ 0.63
SNX1-203ENST00000558040 ERMNQ8TAM6 284 aa19■□□□□ 0.63
SNX1-203ENST00000558040 EPSTI1Q96J88 318 aa19■□□□□ 0.63
SNX1-203ENST00000558040 CCSER1Q9C0I3 900 aa19■□□□□ 0.63
SNX1-203ENST00000558040 CCDC39Q9UFE4 941 aa19■□□□□ 0.63
SNX1-203ENST00000558040 PLXNA1Q9UIW2 1896 aa19■□□□□ 0.63
SNX1-203ENST00000558040 LRRC37A2A6NM11 1700 aa19■□□□□ 0.63
SNX1-203ENST00000558040 POTEMA6NI47 508 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 SPATA31C2B4DYI2 1134 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 SLC26A4O43511 780 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 NR1I2O75469 434 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 PSMD10O75832 226 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 HOXC6P09630 235 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 PSMC4P43686 418 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 PPP2R5CQ13362 524 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 KRT79Q5XKE5 535 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 KCNV1Q6PIU1 500 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 MAMDC4Q6UXC1 1216 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 FMR1NBQ8N0W7 255 aaPredicted RBP18.99■□□□□ 0.63
SNX1-203ENST00000558040 ENGASEQ8NFI3 743 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 RASSF8Q8NHQ8 419 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 GJA10Q969M2 543 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 MAML3Q96JK9 1138 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 UIMC1Q96RL1 719 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 SDF4Q9BRK5 362 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 DACT1Q9NYF0 836 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 VAV3Q9UKW4 847 aa18.99■□□□□ 0.63
SNX1-203ENST00000558040 RGS20O76081 388 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 ECM2O94769 699 aaPredicted RBP18.98■□□□□ 0.63
SNX1-203ENST00000558040 MAP2K1Q02750 393 aaPredicted RBP18.98■□□□□ 0.63
SNX1-203ENST00000558040 HAUS3Q68CZ6 603 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 NCAPH2Q6IBW4 605 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 CAVIN1Q6NZI2 390 aaKnown RBP18.98■□□□□ 0.63
SNX1-203ENST00000558040 SEPT14Q6ZU15 432 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 USP49Q70CQ1 688 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 CABP7Q86V35 215 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 CALML4Q96GE6 196 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 CCDC34Q96HJ3 373 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 APBA2Q99767 749 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 VTA1Q9NP79 307 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 PKD2L1Q9P0L9 805 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 USP25Q9UHP3 1055 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 SYNGAP1Q96PV0 1343 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 KDM3AQ9Y4C1 1321 aa18.98■□□□□ 0.63
SNX1-203ENST00000558040 MGAMO43451 1857 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 ZNF202O95125 648 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms