RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 JADE2Q9NQC1 790 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 DNM1LO00429 736 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 FARP2O94887 1054 aaPredicted RBP29.11■■■□□ 2.25
SMAD6-202ENST00000557916 MNX1P50219 401 aaPredicted RBP29.11■■■□□ 2.25
SMAD6-202ENST00000557916 IRX5P78411 483 aaPredicted RBP29.11■■■□□ 2.25
SMAD6-202ENST00000557916 SEMA3FQ13275 785 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 OR6J1Q8NGC5 347 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 CYP2W1Q8TAV3 490 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 CDHR1Q96JP9 859 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 MYADML2A6NDP7 307 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 BTBD18B2RXH4 712 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 KBTBD13C9JR72 458 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 GH1P01241 217 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 USP11P51784 963 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 SP2Q02086 613 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 MTMR1Q13613 665 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 KLHDC9Q8NEP7 349 aa29.1■■■□□ 2.25
SMAD6-202ENST00000557916 INTS4Q96HW7 963 aaKnown RBP29.1■■■□□ 2.25
SMAD6-202ENST00000557916 CTAGE5O15320 804 aa29.09■■■□□ 2.25
SMAD6-202ENST00000557916 MAFGO15525 162 aa29.09■■■□□ 2.25
SMAD6-202ENST00000557916 NKX3-2P78367 333 aa29.09■■■□□ 2.25
SMAD6-202ENST00000557916 GNASQ5JWF2 1037 aa29.09■■■□□ 2.25
SMAD6-202ENST00000557916 PIK3AP1Q6ZUJ8 805 aa29.09■■■□□ 2.25
SMAD6-202ENST00000557916 DIS3LQ8TF46 1054 aaKnown RBP29.09■■■□□ 2.25
SMAD6-202ENST00000557916 TNFRSF25Q93038 417 aa29.09■■■□□ 2.25
SMAD6-202ENST00000557916 PAWRQ96IZ0 340 aaKnown RBP29.09■■■□□ 2.25
SMAD6-202ENST00000557916 FAM86B1E9PN63 330 aa29.08■■■□□ 2.25
SMAD6-202ENST00000557916 MEIS1O00470 390 aa29.08■■■□□ 2.25
SMAD6-202ENST00000557916 FAM86B2P0C5J1 330 aa29.08■■■□□ 2.25
SMAD6-202ENST00000557916 UBA1P22314 1058 aaKnown RBP29.08■■■□□ 2.25
SMAD6-202ENST00000557916 CST5P28325 142 aaPredicted RBP29.08■■■□□ 2.25
SMAD6-202ENST00000557916 BEX3Q00994 111 aa29.08■■■□□ 2.25
SMAD6-202ENST00000557916 ARHGAP1Q07960 439 aa29.08■■■□□ 2.25
SMAD6-202ENST00000557916 FSCN1Q16658 493 aaKnown RBP29.08■■■□□ 2.25
SMAD6-202ENST00000557916 INF2Q27J81 1249 aa29.08■■■□□ 2.25
SMAD6-202ENST00000557916 EDIL3O43854 480 aa29.07■■■□□ 2.24
SMAD6-202ENST00000557916 GGPS1O95749 300 aa29.07■■■□□ 2.24
SMAD6-202ENST00000557916 CIITAP33076 1130 aa29.07■■■□□ 2.24
SMAD6-202ENST00000557916 NIPA1Q7RTP0 329 aa29.07■■■□□ 2.24
SMAD6-202ENST00000557916 DHX37Q8IY37 1157 aaKnown RBP29.07■■■□□ 2.24
SMAD6-202ENST00000557916 SENP7Q9BQF6 1050 aa29.07■■■□□ 2.24
SMAD6-202ENST00000557916 KCNH7Q9NS40 1196 aa29.07■■■□□ 2.24
SMAD6-202ENST00000557916 MYH7BA7E2Y1 1941 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 LAMC2Q13753 1193 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 NEDD9Q14511 834 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 KCNA10Q16322 511 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 EARS2Q5JPH6 523 aaKnown RBP29.06■■■□□ 2.24
SMAD6-202ENST00000557916 CELF3Q5SZQ8 465 aaKnown RBP29.06■■■□□ 2.24
SMAD6-202ENST00000557916 CCSAPQ6IQ19 270 aaPredicted RBP29.06■■■□□ 2.24
SMAD6-202ENST00000557916 NECAB2Q7Z6G3 386 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 UBE2Q1Q7Z7E8 422 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 PLA2G4DQ86XP0 818 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 PCSK9Q8NBP7 692 aaKnown RBP29.06■■■□□ 2.24
SMAD6-202ENST00000557916 EMID1Q96A84 441 aaPredicted RBP29.06■■■□□ 2.24
SMAD6-202ENST00000557916 TSEN34Q9BSV6 310 aaKnown RBP29.06■■■□□ 2.24
SMAD6-202ENST00000557916 FOXD4L1Q9NU39 408 aa29.06■■■□□ 2.24
SMAD6-202ENST00000557916 SORBS3O60504 671 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 ARP10275 920 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 CPT1AP50416 773 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 MYSM1Q5VVJ2 828 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 LARP1BQ659C4 914 aaKnown RBP29.05■■■□□ 2.24
SMAD6-202ENST00000557916 C11orf49Q9H6J7 331 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 MLXIPQ9HAP2 919 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 PKD2L1Q9P0L9 805 aa29.05■■■□□ 2.24
SMAD6-202ENST00000557916 IGLV3-22A0A075B6J6 115 aa29.04■■■□□ 2.24
SMAD6-202ENST00000557916 ATP9AO75110 1047 aa29.04■■■□□ 2.24
SMAD6-202ENST00000557916 GNL2Q13823 731 aaKnown RBP29.04■■■□□ 2.24
SMAD6-202ENST00000557916 BRDTQ58F21 947 aaPredicted RBP29.04■■■□□ 2.24
SMAD6-202ENST00000557916 GIMAP8Q8ND71 665 aaPredicted RBP29.04■■■□□ 2.24
SMAD6-202ENST00000557916 FOXP1Q9H334 677 aaPredicted RBP29.04■■■□□ 2.24
SMAD6-202ENST00000557916 BCAS3Q9H6U6 928 aa29.04■■■□□ 2.24
SMAD6-202ENST00000557916 FAM205CA6NFA0 338 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 A6NJR5 290 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 H3BQV1 296 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 ZEB2O60315 1214 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 PRR16Q569H4 304 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 IFFO2Q5TF58 517 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 CYFIP1Q7L576 1253 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 NEK8Q86SG6 692 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 AFG1LQ8WV93 481 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 PHF24Q9UPV7 400 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 MOXD2PA6NHM9 499 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 ASGR1P07306 291 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 COL6A1P12109 1028 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 KCNA2P16389 499 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 ACLYP53396 1101 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 SETQ01105 290 aaPredicted RBP29.03■■■□□ 2.24
SMAD6-202ENST00000557916 LETM2Q2VYF4 491 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 FERMT2Q96AC1 680 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 SPATA33Q96N06 139 aa29.03■■■□□ 2.24
SMAD6-202ENST00000557916 SENP6Q9GZR1 1112 aaPredicted RBP29.03■■■□□ 2.24
SMAD6-202ENST00000557916 AGO4Q9HCK5 861 aaKnown RBP29.03■■■□□ 2.24
SMAD6-202ENST00000557916 CYP3A7-CYP3A51PA0A087WV96 503 aa29.02■■■□□ 2.24
SMAD6-202ENST00000557916 HSP90AA1P07900 732 aaKnown RBP29.02■■■□□ 2.24
SMAD6-202ENST00000557916 CYP3A7P24462 503 aa29.02■■■□□ 2.24
SMAD6-202ENST00000557916 RGS19P49795 217 aa29.02■■■□□ 2.24
SMAD6-202ENST00000557916 MOXD1Q6UVY6 613 aa29.02■■■□□ 2.24
SMAD6-202ENST00000557916 TDP2O95551 362 aa29.01■■■□□ 2.23
SMAD6-202ENST00000557916 METTL7BQ6UX53 244 aa29.01■■■□□ 2.23
SMAD6-202ENST00000557916 PPTC7Q8NI37 304 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms