RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 RBM43Q6ZSC3 357 aaKnown RBP11.84□□□□□ -0.51
GABRB3-213ENST00000557765 PLA2G4DQ86XP0 818 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 CEP57L1Q8IYX8 460 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 LENG9Q96B70 501 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 CAPNS2Q96L46 248 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 NUP62CLQ9H1M0 184 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 VTA1Q9NP79 307 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 KCNG1Q9UIX4 513 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 THSD7BQ9C0I4 1608 aa11.84□□□□□ -0.51
GABRB3-213ENST00000557765 VWA3AA6NCI4 1184 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 FAM86B1E9PN63 330 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 GAS7O60861 476 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 PSMD10O75832 226 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 ZNF202O95125 648 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 FAM86B2P0C5J1 330 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 CYP2C8P10632 490 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 RPA1P27694 616 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 HOXD10P28358 340 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 MARCKSP29966 332 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-213ENST00000557765 SNAP25P60880 206 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
GABRB3-213ENST00000557765 PDE4DQ08499 809 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 DGKZQ13574 1117 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
GABRB3-213ENST00000557765 FOXD4L6Q3SYB3 417 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-213ENST00000557765 PRR16Q569H4 304 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 CNNM4Q6P4Q7 775 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 FOXD4L3Q6VB84 417 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-213ENST00000557765 EXOC8Q8IYI6 725 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 SDF4Q9BRK5 362 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 ZNF577Q9BSK1 485 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-213ENST00000557765 TEKT3Q9BXF9 490 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 CSRNP2Q9H175 543 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 TNMDQ9H2S6 317 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 KCNH7Q9NS40 1196 aa11.83□□□□□ -0.52
GABRB3-213ENST00000557765 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
GABRB3-213ENST00000557765 SMC2O95347 1197 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 TDP2O95551 362 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 PFKFB1P16118 471 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 ABCD1P33897 745 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 SLC26A2P50443 739 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 FCGRTP55899 365 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 ZNF445P59923 1031 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 SNW1Q13573 536 aaKnown RBP11.82□□□□□ -0.52
GABRB3-213ENST00000557765 ZNF792Q3KQV3 632 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 LRCH2Q5VUJ6 765 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 OLFML2BQ68BL8 750 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 SHC4Q6S5L8 630 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 SLC30A10Q6XR72 485 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 GPR142Q7Z601 462 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 GPT2Q8TD30 523 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 CCDC47Q96A33 483 aaKnown RBP11.82□□□□□ -0.52
GABRB3-213ENST00000557765 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 TIPINQ9BVW5 301 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 ABHD16BQ9H3Z7 469 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 CLSTN2Q9H4D0 955 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 DISC1Q9NRI5 854 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-213ENST00000557765 RMND1Q9NWS8 449 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 DACT1Q9NYF0 836 aa11.82□□□□□ -0.52
GABRB3-213ENST00000557765 FAM205CA6NFA0 338 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 WDR64B1ANS9 1081 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 SPATA31C2B4DYI2 1134 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 MSH4O15457 936 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 SLC37A4O43826 429 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 LYPLA2O95372 231 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 CAPN2P17655 700 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 ITGB5P18084 799 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 RGS2P41220 211 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 TXKP42681 527 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 MAP2K1Q02750 393 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-213ENST00000557765 EPHA7Q15375 998 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 RRAGBQ5VZM2 374 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 DPP9Q86TI2 863 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 SYMPKQ92797 1274 aaKnown RBP11.81□□□□□ -0.52
GABRB3-213ENST00000557765 HAS1Q92839 578 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 FTOQ9C0B1 505 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABRB3-213ENST00000557765 AGO4Q9HCK5 861 aaKnown RBP11.81□□□□□ -0.52
GABRB3-213ENST00000557765 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 Q9Y3F1 56 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 MYH7BA7E2Y1 1941 aa11.81□□□□□ -0.52
GABRB3-213ENST00000557765 EDIL3O43854 480 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms