RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MYOGP15173 224 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 IGFBP4P22692 258 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 GNAQP50148 359 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 MYSM1Q5VVJ2 828 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 LRRC8DQ7L1W4 858 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 SMARCC2Q8TAQ2 1214 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 PPM1EQ8WY54 764 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-235ENST00000557740 TMEM87BQ96K49 555 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 CTAGE1Q96RT6 745 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
SHMT2-235ENST00000557740 TANC1Q9C0D5 1861 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 SLC27A2O14975 620 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 STAM2O75886 525 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 BAIAP3O94812 1187 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 PARNO95453 639 aaKnown RBP16.89■□□□□ 0.29
SHMT2-235ENST00000557740 KCNJ6P48051 423 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 HSDL1Q3SXM5 330 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 PHOSPHO2Q8TCD6 241 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.29
SHMT2-235ENST00000557740 FRMPD4Q14CM0 1322 aa16.89■□□□□ 0.29
SHMT2-235ENST00000557740 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
SHMT2-235ENST00000557740 HAS3O00219 553 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
SHMT2-235ENST00000557740 CA3P07451 260 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 CALM1P0DP23 149 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 CALM2P0DP24 149 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 CALM3P0DP25 149 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 SMARCA1P28370 1054 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 SP2Q02086 613 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 RBL2Q08999 1139 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 PTK7Q13308 1070 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 ADGRE1Q14246 886 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
SHMT2-235ENST00000557740 GPKOWQ92917 476 aaPredicted RBP eCLIP16.88■□□□□ 0.29
SHMT2-235ENST00000557740 MYO9BQ13459 2157 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 PLEKHA8P1O95397 391 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 CKBP12277 381 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 RXRAP19793 462 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 NEDD9Q14511 834 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 INPP4AQ96PE3 977 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-235ENST00000557740 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 TTC28Q96AY4 2481 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 CHD9Q3L8U1 2897 aa16.87■□□□□ 0.29
SHMT2-235ENST00000557740 EYSQ5T1H1 3165 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 FIBPO43427 364 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 ICAM3P32942 547 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 LIFRP42702 1097 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 MRPS9P82933 396 aaKnown RBP16.86■□□□□ 0.29
SHMT2-235ENST00000557740 RNF20Q5VTR2 975 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 CNKSR3Q6P9H4 555 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-235ENST00000557740 HERC6Q8IVU3 1022 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 C16orf70Q9BSU1 422 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 RTEL1Q9NZ71 1219 aa16.86■□□□□ 0.29
SHMT2-235ENST00000557740 C17orf102A2RUQ5 167 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 PIK3CDO00329 1044 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 LGALS2P05162 132 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 WDR5P61964 334 aaKnown RBP16.85■□□□□ 0.29
SHMT2-235ENST00000557740 ZNF200P98182 395 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-235ENST00000557740 NECTIN1Q15223 517 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 CCDC85BQ15834 202 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-235ENST00000557740 PCNX4Q63HM2 1172 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 XRRA1Q6P2D8 792 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 METTL7BQ6UX53 244 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 RAB11FIP4Q86YS3 637 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 MICALL1Q8N3F8 863 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
SHMT2-235ENST00000557740 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
SHMT2-235ENST00000557740 LRRC2Q9BYS8 371 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 PRDM6Q9NQX0 595 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 THEGQ9P2T0 379 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 PRUNE2Q8WUY3 3088 aa16.85■□□□□ 0.29
SHMT2-235ENST00000557740 SPATA31C2B4DYI2 1134 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 H3BRB1 525 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 TLL1O43897 1013 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 NBNO60934 754 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 CXCL10P02778 98 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 TRIM71Q2Q1W2 868 aaKnown RBP16.84■□□□□ 0.29
SHMT2-235ENST00000557740 TJAP1Q5JTD0 557 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 SYNE3Q6ZMZ3 975 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 NLRX1Q86UT6 975 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
SHMT2-235ENST00000557740 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
SHMT2-235ENST00000557740 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
SHMT2-235ENST00000557740 ZNF215Q9UL58 517 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-235ENST00000557740 GBF1Q92538 1859 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms