RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 MAP3K20Q9NYL2 800 aaKnown RBP10.37□□□□□ -0.75
CHD8-214ENST00000557727 ORC3Q9UBD5 711 aaPredicted RBP10.37□□□□□ -0.75
CHD8-214ENST00000557727 LOC102724159A0A0B4J2E5 919 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 SMCO2A6NFE2 343 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 NRG2O14511 850 aaPredicted RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 ADCY6O43306 1168 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 ZNF865P0CJ78 1059 aaPredicted RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 NAPAP54920 295 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 PWP2Q15269 919 aaKnown RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 MTFR1Q15390 333 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 CPLX2Q6PUV4 134 aaKnown RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 ARMCX2Q7L311 632 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 TEX2Q8IWB9 1127 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 TRIM22Q8IYM9 498 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 DAGLBQ8NCG7 672 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 DNERQ8NFT8 737 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 TNFRSF25Q93038 417 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 PDCD2LQ9BRP1 358 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 PHF20Q9BVI0 1012 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 PRR14Q9BWN1 585 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 PAK6Q9NQU5 681 aaPredicted RBP10.36□□□□□ -0.75
CHD8-214ENST00000557727 PXMP2Q9NR77 195 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 TMEM260Q9NX78 707 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 ALPK3Q96L96 1907 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 MYH15Q9Y2K3 1946 aa10.36□□□□□ -0.75
CHD8-214ENST00000557727 CCND3P30281 292 aaPredicted RBP10.35□□□□□ -0.75
CHD8-214ENST00000557727 GGCXP38435 758 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 ADCY7P51828 1080 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 MRPS9P82933 396 aaKnown RBP10.35□□□□□ -0.75
CHD8-214ENST00000557727 PRAMEF19Q5SWL8 479 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 TMEM63BQ5T3F8 832 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
CHD8-214ENST00000557727 RMDN3Q96TC7 470 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 UNC93B1Q9H1C4 597 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 SLC5A4Q9NY91 659 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 KCNJ14Q9UNX9 436 aa10.35□□□□□ -0.75
CHD8-214ENST00000557727 RBM47A0AV96 593 aaKnown RBP10.34□□□□□ -0.75
CHD8-214ENST00000557727 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
CHD8-214ENST00000557727 LCE2BO14633 110 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 EIF2AK2P19525 551 aaKnown RBP10.34□□□□□ -0.75
CHD8-214ENST00000557727 PTGS1P23219 599 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 AKAP17AQ02040 695 aaKnown RBP10.34□□□□□ -0.75
CHD8-214ENST00000557727 PGM5Q15124 567 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 VSIG10LQ86VR7 867 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 RASGRP4Q8TDF6 673 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 NSUN6Q8TEA1 469 aaKnown RBP10.34□□□□□ -0.75
CHD8-214ENST00000557727 CUL5Q93034 780 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 ABHD8Q96I13 439 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 ALG1Q9BT22 464 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 ADD3Q9UEY8 706 aaKnown RBP10.34□□□□□ -0.75
CHD8-214ENST00000557727 NRBP1Q9UHY1 535 aa10.34□□□□□ -0.75
CHD8-214ENST00000557727 MKI67P46013 3256 aaKnown RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 ASB14A6NK59 587 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 NR3C2P08235 984 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 CCL5P13501 91 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 MRPL12P52815 198 aaKnown RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 COPS2P61201 443 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 UBXN2AP68543 259 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 EARS2Q5JPH6 523 aaKnown RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 MFSD14CQ5VZR4 134 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 KRT40Q6A162 431 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 CCDC148Q8NFR7 591 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 IWS1Q96ST2 819 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 ABHD16BQ9H3Z7 469 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 PDGFCQ9NRA1 345 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 BIN2Q9UBW5 565 aaPredicted RBP10.33□□□□□ -0.76
CHD8-214ENST00000557727 PCDHA6Q9UN73 950 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 PCDHA4Q9UN74 947 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 PCDHA8Q9Y5H6 950 aa10.33□□□□□ -0.76
CHD8-214ENST00000557727 CTAGE5O15320 804 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 ARIH2O95376 493 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 MMP1P03956 469 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 GNA11P29992 359 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 SREBF1P36956 1147 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
CHD8-214ENST00000557727 PTGDRQ13258 359 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 ACVR2BQ13705 512 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 CCDC144BQ3MJ40 725 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 ARHGEF16Q5VV41 709 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 JAKMIP3Q5VZ66 844 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 PCNX4Q63HM2 1172 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 GALNT17Q6IS24 598 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 CCDC62Q6P9F0 684 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 BLIDQ8IZY5 108 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 REXO1Q8N1G1 1221 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms