RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZNF76P36508 570 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 MTMR1Q13613 665 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 KRT40Q6A162 431 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 UBE2Q1Q7Z7E8 422 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 IL31RAQ8NI17 732 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 SHISA4Q96DD7 197 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 AIFM3Q96NN9 605 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 POLR3EQ9NVU0 708 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 SYNRGQ9UMZ2 1314 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 CYP3A7-CYP3A51PA0A087WV96 503 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 DYNC1LI2O43237 492 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-234ENST00000557703 PPFIA4O75335 1185 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 CYP3A7P24462 503 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 FSCN1Q16658 493 aaKnown RBP15.58■□□□□ 0.08
SHMT2-234ENST00000557703 GNASQ5JWF2 1037 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 CELF3Q5SZQ8 465 aaKnown RBP15.58■□□□□ 0.08
SHMT2-234ENST00000557703 C1orf53Q5VUE5 145 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 PPP4R3AQ6IN85 833 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 CCSAPQ6IQ19 270 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-234ENST00000557703 DHX37Q8IY37 1157 aaKnown RBP15.58■□□□□ 0.08
SHMT2-234ENST00000557703 PPTC7Q8NI37 304 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 HTATIP2Q9BUP3 242 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 PHF24Q9UPV7 400 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 NFASCO94856 1347 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 ELP1O95163 1332 aa15.58■□□□□ 0.08
SHMT2-234ENST00000557703 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-234ENST00000557703 C6orf222P0C671 652 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-234ENST00000557703 COL6A1P12109 1028 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 ITGB5P18084 799 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 SOX10P56693 466 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 ORC2Q13416 577 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-234ENST00000557703 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 METTL7BQ6UX53 244 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 DIS3L2Q8IYB7 885 aaKnown RBP15.57■□□□□ 0.08
SHMT2-234ENST00000557703 OR6J1Q8NGC5 347 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 TBCKQ8TEA7 893 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 KCNH7Q9NS40 1196 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 TBC1D22BQ9NU19 505 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 TMEM260Q9NX78 707 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 KCNJ14Q9UNX9 436 aa15.57■□□□□ 0.08
SHMT2-234ENST00000557703 PGK1P00558 417 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 HOXD8P13378 290 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-234ENST00000557703 GJB2P29033 226 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 TRAPPC10P48553 1259 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 DGKDQ16760 1214 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 LY6KQ17RY6 165 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 Q4G0T1 1027 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 NEK8Q86SG6 692 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 GLT1D1Q96MS3 346 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 C11orf49Q9H6J7 331 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 MLXIPQ9HAP2 919 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
SHMT2-234ENST00000557703 TBX3O15119 743 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 ADCY6O43306 1168 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 ARIH2O95376 493 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 UBA1P22314 1058 aaKnown RBP15.55■□□□□ 0.08
SHMT2-234ENST00000557703 U2AF2P26368 475 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHMT2-234ENST00000557703 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-234ENST00000557703 ACLYP53396 1101 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 KCNA10Q16322 511 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 TNFRSF25Q93038 417 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 MBOAT7Q96N66 472 aa15.55■□□□□ 0.08
SHMT2-234ENST00000557703 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 MROH7Q68CQ1 1323 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 IGLV3-22A0A075B6J6 115 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 BTBD18B2RXH4 712 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 H3BQV1 296 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 CTAGE5O15320 804 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 GGPS1O95749 300 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 KCNA2P16389 499 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 ARHGAP1Q07960 439 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 SEMA3FQ13275 785 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 GNL2Q13823 731 aaKnown RBP15.54■□□□□ 0.08
SHMT2-234ENST00000557703 BECN1Q14457 450 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 GJC2Q5T442 439 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-234ENST00000557703 ANO1Q5XXA6 986 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 LARP1BQ659C4 914 aaKnown RBP15.54■□□□□ 0.08
SHMT2-234ENST00000557703 PLA2G4DQ86XP0 818 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 NOSTRINQ8IVI9 506 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 RASGRP4Q8TDF6 673 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 PAWRQ96IZ0 340 aaKnown RBP15.54■□□□□ 0.08
SHMT2-234ENST00000557703 RIT2Q99578 217 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 SDF4Q9BRK5 362 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 KATNAL1Q9BW62 490 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 TCEAL9Q9UHQ7 104 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 DDX49Q9Y6V7 483 aaKnown RBP15.54■□□□□ 0.08
SHMT2-234ENST00000557703 MYH7BA7E2Y1 1941 aa15.54■□□□□ 0.08
SHMT2-234ENST00000557703 FAM86B1E9PN63 330 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 IPO5O00410 1097 aaKnown RBP15.53■□□□□ 0.08
SHMT2-234ENST00000557703 NOP56O00567 594 aaKnown RBP15.53■□□□□ 0.08
SHMT2-234ENST00000557703 ASGR1P07306 291 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 HSP90AA1P07900 732 aaKnown RBP15.53■□□□□ 0.08
SHMT2-234ENST00000557703 FAM86B2P0C5J1 330 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 SP2Q02086 613 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 PIK3AP1Q6ZUJ8 805 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
SHMT2-234ENST00000557703 PGBD1Q96JS3 809 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 FAM20AQ96MK3 541 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 SPATA33Q96N06 139 aa15.53■□□□□ 0.08
SHMT2-234ENST00000557703 TOX2Q96NM4 488 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms