RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 RGPD4Q7Z3J3 1758 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 CTTNBP2Q8WZ74 1663 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 PREX2Q70Z35 1606 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 NEMP1O14524 444 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 HYAL3O43820 417 aaPredicted RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 EIF3JO75822 258 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 SNRPB2P08579 225 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 CAP2P40123 477 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 ID4P47928 161 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 RNF4P78317 190 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 PIN1Q13526 163 aaPredicted RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 UBE4AQ14139 1066 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 NTRK3Q16288 839 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 NOL9Q5SY16 702 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 NUTM2GQ5VZR2 741 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 CDCA2Q69YH5 1023 aaPredicted RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 ARHGEF39Q8N4T4 335 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 CNTD1Q8N815 330 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 OR2W6PQ8NHA6 318 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 PI4K2BQ8TCG2 481 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 COG1Q8WTW3 980 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 PPP1R13LQ8WUF5 828 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 TMPRSS13Q9BYE2 586 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 PUS7LQ9H0K6 701 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 IFT22Q9H7X7 185 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 TRHDEQ9UKU6 1024 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 NOB1Q9ULX3 412 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 TRAF6Q9Y4K3 522 aa6.34□□□□□ -1.39
MTHFD1-216ENST00000557539 PTPN23Q9H3S7 1636 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 NPHP3Q7Z494 1330 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 TTC28Q96AY4 2481 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 TCRBV16S1A1N1A0A5B0 115 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 PYGMP11217 842 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 ADH5P11766 374 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 ECI1P42126 302 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 GFRA1P56159 465 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 ZNF445P59923 1031 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 LRP8Q14114 963 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 PIK3R6Q5UE93 754 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 PPP4R4Q6NUP7 873 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 USP53Q70EK8 1073 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 ARMCX6Q7L4S7 300 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 PASD1Q8IV76 773 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 TMEM145Q8NBT3 493 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 TTC8Q8TAM2 541 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 CHMP4CQ96CF2 233 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 KREMEN1Q96MU8 473 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 UBL7Q96S82 380 aaPredicted RBP6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 NOL6Q9H6R4 1146 aaKnown RBP6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 CEP131Q9UPN4 1083 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 PCDHB12Q9Y5F1 795 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 CDC42BPBQ9Y5S2 1711 aa6.33□□□□□ -1.4
MTHFD1-216ENST00000557539 DHX29Q7Z478 1369 aaKnown RBP6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 VIRMAQ69YN4 1812 aaKnown RBP6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 CRTAMO95727 393 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 DRD2P14416 443 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 HOXC12P31275 282 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 ASPAP45381 313 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 SCNN1BP51168 640 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 MAP4K2Q12851 820 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 MAP3K12Q12852 859 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 PRSS53Q2L4Q9 553 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 SKOR2Q2VWA4 1001 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 PTF1AQ7RTS3 328 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 MAMDC2Q7Z304 686 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 WNK4Q96J92 1243 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 RTFDC1Q9BY42 306 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 CDH19Q9H159 772 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 CYP4F12Q9HCS2 524 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 ZNF180Q9UJW8 692 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 PCDHA9Q9Y5H5 950 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 MUC3AQ02505 3323 aa6.32□□□□□ -1.4
MTHFD1-216ENST00000557539 MKI67P46013 3256 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 INO80Q9ULG1 1556 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 RANBP2P49792 3224 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 BRCA2P51587 3418 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 CFAP65Q6ZU64 1925 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 SETXQ7Z333 2677 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 A0A087WZG4 1122 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 E2F8A0AVK6 867 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 MEGF11A6BM72 1044 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 B4E1Z4 1266 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 GABRDO14764 452 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 LRIG2O94898 1065 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 APPP05067 770 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 MYL1P05976 194 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 BPIP17213 487 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 OS9Q13438 667 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 MLC1Q15049 377 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 SYDE2Q5VT97 1194 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 ZCCHC8Q6NZY4 707 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 SLC4A10Q6U841 1118 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms