RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	SPATA33	Q96N06	139 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	INPP4A	Q96PE3	977 aa	Predicted RBP	11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	SLC26A6	Q9BXS9	759 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	C22orf23	Q9BZE7	217 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	TCEAL9	Q9UHQ7	104 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	DNAH12	Q6ZR08	3092 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	SCN10A	Q9Y5Y9	1956 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	STXBP3	O00186	592 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	PPFIA4	O75335	1185 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	DEXI	O95424	95 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	UBA1	P22314	1058 aa	Known RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	ICAM3	P32942	547 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	CCT2	P78371	535 aa	Known RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	FPGS	Q05932	587 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	FAAP100	Q0VG06	881 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	FUT2	Q10981	343 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	PPIG	Q13427	754 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	MTMR1	Q13613	665 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	UBE2S	Q16763	222 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	CELF3	Q5SZQ8	465 aa	Known RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	METTL7B	Q6UX53	244 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	FAM126B	Q8IXS8	530 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	REXO1	Q8N1G1	1221 aa	Known RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	SLC43A3	Q8NBI5	491 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	IL31RA	Q8NI17	732 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	COPS5	Q92905	334 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	SENP7	Q9BQF6	1050 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	SLK	Q9H2G2	1235 aa	Predicted RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	MTIF3	Q9H2K0	278 aa	Known RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	SH3GLB2	Q9NR46	395 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	ZNF215	Q9UL58	517 aa	Predicted RBP	11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	PCDHA6	Q9UN73	950 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	PCDHA8	Q9Y5H6	950 aa		11.14	□□□□□ -0.63
RPS29-208	ENST00000557519	SPATA31C2	B4DYI2	1134 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	TIMP1	P01033	207 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	ZNF76	P36508	570 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	CHMP4BP1	P59074	171 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	TOB2	Q14106	344 aa	Predicted RBP	11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	MYSM1	Q5VVJ2	828 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	C7orf31	Q8N865	590 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	IL27	Q8NEV9	243 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	WASF1	Q92558	559 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	BAD	Q92934	168 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	TNPO1	Q92973	898 aa	Known RBP	11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	ANO3	Q9BYT9	981 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	ZMYND12	Q9H0C1	365 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	PRO3102	Q9H379	93 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	HIPK3	Q9H422	1215 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	RTEL1	Q9NZ71	1219 aa		11.13	□□□□□ -0.63
RPS29-208	ENST00000557519	TRIM43B	A6NCK2	446 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	RGS20	O76081	388 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	CD4	P01730	458 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	NLRP5	P59047	1200 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	PSMC6	P62333	389 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	IRX5	P78411	483 aa	Predicted RBP	11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	MRPS9	P82933	396 aa	Known RBP	11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	SET	Q01105	290 aa	Predicted RBP	11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	STK3	Q13188	491 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	BFSP2	Q13515	415 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	NBPF20	Q3BBV1	942 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	TMEM63B	Q5T3F8	832 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	GALNT17	Q6IS24	598 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	MFSD5	Q6N075	450 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	RETREG2	Q8NC44	543 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	PHKB	Q93100	1093 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	SDF4	Q9BRK5	362 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	TBX21	Q9UL17	535 aa		11.12	□□□□□ -0.63
RPS29-208	ENST00000557519	B4GALT4	O60513	344 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	F2	P00734	622 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	GNAT1	P11488	350 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	SREBF1	P36956	1147 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	PSEN2	P49810	448 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	MFSD10	Q14728	455 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	LRIT3	Q3SXY7	679 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	CEP55	Q53EZ4	464 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	CYFIP1	Q7L576	1253 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	NIPA1	Q7RTP0	329 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	SH3RF1	Q7Z6J0	888 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	SESTD1	Q86VW0	696 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	RPUSD2	Q8IZ73	545 aa	Known RBP	11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	CAGE1	Q8TC20	777 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	IL17RA	Q96F46	866 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	PPP1R12C	Q9BZL4	782 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	NCOA5	Q9HCD5	579 aa	Known RBP	11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	BRMS1	Q9HCU9	246 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	JADE2	Q9NQC1	790 aa		11.11	□□□□□ -0.63
RPS29-208	ENST00000557519	STK36	Q9NRP7	1315 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	PITPNM1	O00562	1244 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	PFKFB2	O60825	505 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	PARN	O95453	639 aa	Known RBP	11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	PFKM	P08237	780 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	ZNF286B	P0CG31	522 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	HOXD8	P13378	290 aa	Predicted RBP	11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	PTGS1	P23219	599 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	RFC2	P35250	354 aa		11.1	□□□□□ -0.63
RPS29-208	ENST00000557519	CLK2	P49760	499 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms