RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MUM1L1Q5H9M0 696 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 SLFN13Q68D06 897 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 IQSEC1Q6DN90 963 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 ZSCAN25Q6NSZ9 544 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 GIMAP6Q6P9H5 292 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 SPRED2Q7Z698 418 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 DEFB128Q7Z7B8 93 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
VPS33B-207ENST00000557470 ARNTL2Q8WYA1 636 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 OSBP2Q969R2 916 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 MRRFQ96E11 262 aaKnown RBP6.95□□□□□ -1.3
VPS33B-207ENST00000557470 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
VPS33B-207ENST00000557470 C11orf16Q9NQ32 467 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 ISY1Q9ULR0 285 aaKnown RBP6.95□□□□□ -1.3
VPS33B-207ENST00000557470 HCN4Q9Y3Q4 1203 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 MYH4Q9Y623 1939 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 TNKSO95271 1327 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 PLIN4Q96Q06 1357 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 CARNS1A5YM72 827 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 FAM86C2PA6NEL3 165 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 DXOO77932 396 aaKnown RBP6.94□□□□□ -1.3
VPS33B-207ENST00000557470 FDX1P10109 184 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 ALAS1P13196 640 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 SLC1A4P43007 532 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 TDO2P48775 406 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
VPS33B-207ENST00000557470 TAP1Q03518 808 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 IKQ13123 557 aaPredicted RBP6.94□□□□□ -1.3
VPS33B-207ENST00000557470 TKFCQ3LXA3 575 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 DUSP28Q4G0W2 176 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 TMEM31Q5JXX7 168 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 KIAA1211Q6ZU35 1233 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 RASGRP2Q7LDG7 609 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 FAM160B2Q86V87 743 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 ZNF444Q8N0Y2 327 aaPredicted RBP6.94□□□□□ -1.3
VPS33B-207ENST00000557470 PPP1R13LQ8WUF5 828 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 SPATA32Q96LK8 384 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 TRERF1Q96PN7 1200 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 SLC9A7Q96T83 725 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 VTA1Q9NP79 307 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 CYP39A1Q9NYL5 469 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 KIAA1522Q9P206 1035 aaPredicted RBP6.94□□□□□ -1.3
VPS33B-207ENST00000557470 PCDHGC3Q9UN70 934 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 COG5Q9UP83 839 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 Q9Y3F1 56 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 BRWD1Q9NSI6 2320 aa6.94□□□□□ -1.3
VPS33B-207ENST00000557470 SCN5AQ14524 2016 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 FAM187AA6NFU0 413 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 M0R2C6 588 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 GPAA1O43292 621 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
VPS33B-207ENST00000557470 LPXNO60711 386 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
VPS33B-207ENST00000557470 MYL3P08590 195 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 SUPT20HL2P0C7V6 817 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 TSPY3P0CV98 308 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 TSPY8P0CW00 308 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 ACTN1P12814 892 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 NCLP19338 710 aaKnown RBP6.93□□□□□ -1.3
VPS33B-207ENST00000557470 MCCP23508 829 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 GRB10Q13322 594 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 PKDCCQ504Y2 493 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 TSHZ3Q63HK5 1081 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 HERC6Q8IVU3 1022 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 KBTBD3Q8NAB2 608 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 PHOSPHO2Q8TCD6 241 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 CHURC1Q8WUH1 139 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 STAG1Q8WVM7 1258 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 SPIRE2Q8WWL2 714 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 APPBP2Q92624 585 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 GMCL1Q96IK5 515 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 WDR11Q9BZH6 1224 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 ZNF287Q9HBT7 754 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 ZBTB40Q9NUA8 1239 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 LCTP09848 1927 aa6.93□□□□□ -1.3
VPS33B-207ENST00000557470 LCHNA4D1U4 455 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 RNF113AO15541 343 aaKnown RBP6.92□□□□□ -1.3
VPS33B-207ENST00000557470 PLA2G6O60733 806 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 GPR37L1O60883 481 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 DGAT1O75907 488 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 APPP05067 770 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 IQCF3P0C7M6 154 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 GNAT2P19087 354 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 NDUFV2P19404 249 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 RFC2P35250 354 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 CPT1AP50416 773 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 ALDH5A1P51649 535 aaPredicted RBP6.92□□□□□ -1.3
VPS33B-207ENST00000557470 TFAP4Q01664 338 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 NBPF20Q3BBV1 942 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 FAM47CQ5HY64 1035 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 TMCO2Q7Z6W1 182 aaPredicted RBP6.92□□□□□ -1.3
VPS33B-207ENST00000557470 IFNL3Q8IZI9 196 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 GDPD5Q8WTR4 605 aa6.92□□□□□ -1.3
VPS33B-207ENST00000557470 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
VPS33B-207ENST00000557470 MTG1Q9BT17 334 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms