RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 UBE2SQ16763 222 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 CELF3Q5SZQ8 465 aaKnown RBP15.81■□□□□ 0.12
VPS33B-206ENST00000557358 TMEM63BQ5T3F8 832 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 NFRKBQ6P4R8 1299 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 TDHQ8IZJ6 230 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 IL31RAQ8NI17 732 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 SLKQ9H2G2 1235 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-206ENST00000557358 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
VPS33B-206ENST00000557358 FAM217BQ9NTX9 383 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-206ENST00000557358 RTEL1Q9NZ71 1219 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 MAFGO15525 162 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 PPFIA4O75335 1185 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 XBP1P17861 261 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 PTGS1P23219 599 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 ICAM3P32942 547 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 ZNF76P36508 570 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 PSMC6P62333 389 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 PTPN11Q06124 597 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-206ENST00000557358 FAAP100Q0VG06 881 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-206ENST00000557358 FAM126BQ8IXS8 530 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 TMEM199Q8N511 208 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 SLC43A3Q8NBI5 491 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 BADQ92934 168 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 GPRASP2Q96D09 838 aa15.8■□□□□ 0.12
VPS33B-206ENST00000557358 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-206ENST00000557358 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 TRIM43BA6NCK2 446 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 TIMP1P01033 207 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 UBA1P22314 1058 aaKnown RBP15.79■□□□□ 0.12
VPS33B-206ENST00000557358 MRPS9P82933 396 aaKnown RBP15.79■□□□□ 0.12
VPS33B-206ENST00000557358 FPGSQ05932 587 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 STK3Q13188 491 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 PPIGQ13427 754 aaKnown RBP eCLIP15.79■□□□□ 0.12
VPS33B-206ENST00000557358 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 MYSM1Q5VVJ2 828 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 METTL7BQ6UX53 244 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 REXO1Q8N1G1 1221 aaKnown RBP15.79■□□□□ 0.12
VPS33B-206ENST00000557358 C7orf31Q8N865 590 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 PHKBQ93100 1093 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 TRIM43Q96BQ3 446 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-206ENST00000557358 SENP7Q9BQF6 1050 aa15.79■□□□□ 0.12
VPS33B-206ENST00000557358 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-206ENST00000557358 SPATA31C2B4DYI2 1134 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 RGS20O76081 388 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 DEXIO95424 95 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 MTMR1Q13613 665 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
VPS33B-206ENST00000557358 CCDC155Q8N6L0 562 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 ANO3Q9BYT9 981 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 PRO3102Q9H379 93 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 HIPK3Q9H422 1215 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 NCOA5Q9HCD5 579 aaKnown RBP15.78■□□□□ 0.12
VPS33B-206ENST00000557358 SH3GLB2Q9NR46 395 aa15.78■□□□□ 0.12
VPS33B-206ENST00000557358 ZNF215Q9UL58 517 aaPredicted RBP15.78■□□□□ 0.12
VPS33B-206ENST00000557358 SCN10AQ9Y5Y9 1956 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 NEK4P51957 841 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 NLRP5P59047 1200 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 BFSP2Q13515 415 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 CYFIP1Q7L576 1253 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 RETREG2Q8NC44 543 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 WASF1Q92558 559 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 ZFP91Q96JP5 570 aaPredicted RBP15.77■□□□□ 0.12
VPS33B-206ENST00000557358 C22orf23Q9BZE7 217 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 PPP1R12CQ9BZL4 782 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 ZMYND12Q9H0C1 365 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 MTIF3Q9H2K0 278 aaKnown RBP15.77■□□□□ 0.12
VPS33B-206ENST00000557358 JADE2Q9NQC1 790 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 TCEAL9Q9UHQ7 104 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 TBX21Q9UL17 535 aa15.77■□□□□ 0.12
VPS33B-206ENST00000557358 SORBS3O60504 671 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 B4GALT4O60513 344 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 CD4P01730 458 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 MFSD10Q14728 455 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 NTRK3Q16288 839 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 JAKMIP3Q5VZ66 844 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 MFSD5Q6N075 450 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 SDF4Q9BRK5 362 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 LARP6Q9BRS8 491 aaKnown RBP15.76■□□□□ 0.11
VPS33B-206ENST00000557358 ALG1Q9BT22 464 aa15.76■□□□□ 0.11
VPS33B-206ENST00000557358 GRIN2DO15399 1336 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 SREBF1P36956 1147 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 PSEN2P49810 448 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 KIAA0753Q2KHM9 967 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 HSDL1Q3SXM5 330 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 GALNT17Q6IS24 598 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 RPUSD2Q8IZ73 545 aaKnown RBP15.75■□□□□ 0.11
VPS33B-206ENST00000557358 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
VPS33B-206ENST00000557358 MXRA8Q9BRK3 442 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 TRPV6Q9H1D0 765 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 UBIAD1Q9Y5Z9 338 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 LTBP2Q14767 1821 aa15.75■□□□□ 0.11
VPS33B-206ENST00000557358 PFKFB2O60825 505 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 F2P00734 622 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 ZNF286BP0CG31 522 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 GNAT1P11488 350 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 HOXD8P13378 290 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms