RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 RTEL1Q9NZ71 1219 aa8.98□□□□□ -0.97
PSEN1-222ENST00000557356 SMCHD1A6NHR9 2005 aa8.98□□□□□ -0.97
PSEN1-222ENST00000557356 MYADML2A6NDP7 307 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 KIAA0355O15063 1070 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 PQBP1O60828 265 aaKnown RBP8.97□□□□□ -0.97
PSEN1-222ENST00000557356 GGPS1O95749 300 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 MRPS9P82933 396 aaKnown RBP8.97□□□□□ -0.97
PSEN1-222ENST00000557356 MTMR1Q13613 665 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 PKN1Q16512 942 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 MYSM1Q5VVJ2 828 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 METTL7BQ6UX53 244 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 NIPA1Q7RTP0 329 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 AFG1LQ8WV93 481 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 PHKBQ93100 1093 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 SPATA33Q96N06 139 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 NCOA5Q9HCD5 579 aaKnown RBP8.97□□□□□ -0.97
PSEN1-222ENST00000557356 JADE2Q9NQC1 790 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-222ENST00000557356 ZMYND8Q9ULU4 1186 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-222ENST00000557356 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 GTF3C3Q9Y5Q9 886 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 UBIAD1Q9Y5Z9 338 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 DDX49Q9Y6V7 483 aaKnown RBP8.97□□□□□ -0.97
PSEN1-222ENST00000557356 MYH6P13533 1939 aa8.97□□□□□ -0.97
PSEN1-222ENST00000557356 RGS20O76081 388 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 ARIH2O95376 493 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 MMP3P08254 477 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 CYP3A4P08684 503 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 GNAT1P11488 350 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 SYN1P17600 705 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 SREBF1P36956 1147 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
PSEN1-222ENST00000557356 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.98
PSEN1-222ENST00000557356 USP11P51784 963 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 AK2P54819 239 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 ARHGAP1Q07960 439 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 FAAP100Q0VG06 881 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 STK3Q13188 491 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 UBE2SQ16763 222 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 C8orf34Q49A92 452 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 CEP55Q53EZ4 464 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 CHRDL2Q6WN34 429 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 FAM126BQ8IXS8 530 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 TMEM199Q8N511 208 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 IL31RAQ8NI17 732 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 GDF15Q99988 308 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 MXRA8Q9BRK3 442 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 SDF4Q9BRK5 362 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 ANO3Q9BYT9 981 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.98
PSEN1-222ENST00000557356 SH2B1Q9NRF2 756 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-222ENST00000557356 TCEAL9Q9UHQ7 104 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 ZNF215Q9UL58 517 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-222ENST00000557356 COLQQ9Y215 455 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-222ENST00000557356 NOD1Q9Y239 953 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 STK36Q9NRP7 1315 aa8.96□□□□□ -0.98
PSEN1-222ENST00000557356 ST18O60284 1047 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 ABCB7O75027 752 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 PARNO95453 639 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 SEC24BO95487 1268 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 TIMP1P01033 207 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 CD4P01730 458 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 HOXD8P13378 290 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 UBA1P22314 1058 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 MAGEA10P43363 369 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 MCM2P49736 904 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 ARHGAP4P98171 946 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 SCRN1Q12765 414 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 BFSP2Q13515 415 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 TRIM29Q14134 588 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 RABEP1Q15276 862 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 NBPF20Q3BBV1 942 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 FAM47CQ5HY64 1035 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 HABP4Q5JVS0 413 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 TMEM63BQ5T3F8 832 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 JAKMIP3Q5VZ66 844 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 SESTD1Q86VW0 696 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 RPUSD2Q8IZ73 545 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 C7orf31Q8N865 590 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 SEPT1Q8WYJ6 367 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 COPS5Q92905 334 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 NAP1L4Q99733 375 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 LLPHQ9BRT6 129 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 BRMS1Q9HCU9 246 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 PDLIM7Q9NR12 457 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 ORC3Q9UBD5 711 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 TPCN1Q9ULQ1 816 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 PCDHA4Q9UN74 947 aa8.95□□□□□ -0.98
PSEN1-222ENST00000557356 BAZ2BQ9UIF8 2168 aaKnown RBP8.95□□□□□ -0.98
PSEN1-222ENST00000557356 H3BRB1 525 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 MEIS1O00470 390 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 RPLP2P05387 115 aaKnown RBP8.94□□□□□ -0.98
PSEN1-222ENST00000557356 ITGB5P18084 799 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 PSMC6P62333 389 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 IRX5P78411 483 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-222ENST00000557356 SETQ01105 290 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-222ENST00000557356 SP2Q02086 613 aa8.94□□□□□ -0.98
PSEN1-222ENST00000557356 PPIGQ13427 754 aaKnown RBP eCLIP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms