RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RBL2Q08999 1139 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 PTK7Q13308 1070 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 GPNMBQ14956 572 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 CCDC85BQ15834 202 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-213ENST00000557262 HSDL1Q3SXM5 330 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 TJAP1Q5JTD0 557 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 TMTC2Q8N394 836 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 DHX38Q92620 1227 aaKnown RBP18.38■□□□□ 0.53
TUBB3-213ENST00000557262 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-213ENST00000557262 MTA3Q9BTC8 594 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 MLXIPQ9HAP2 919 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 PRDM6Q9NQX0 595 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 SPTBN5Q9NRC6 3674 aaKnown RBP18.37■□□□□ 0.53
TUBB3-213ENST00000557262 CA3P07451 260 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 CKBP12277 381 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 KIF5BP33176 963 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 HERC6Q8IVU3 1022 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 CTCFLQ8NI51 663 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-213ENST00000557262 ATXN2LQ8WWM7 1075 aaKnown RBP18.37■□□□□ 0.53
TUBB3-213ENST00000557262 PIBF1Q8WXW3 757 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 LY9Q9HBG7 655 aa18.37■□□□□ 0.53
TUBB3-213ENST00000557262 BAZ2BQ9UIF8 2168 aaKnown RBP18.37■□□□□ 0.53
TUBB3-213ENST00000557262 MYH7BA7E2Y1 1941 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 SORBS3O60504 671 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 STAM2O75886 525 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 DDAH1O94760 285 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 UBA1P22314 1058 aaKnown RBP18.36■□□□□ 0.53
TUBB3-213ENST00000557262 TRIP12Q14669 1992 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-213ENST00000557262 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 ZNF654Q8IZM8 581 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
TUBB3-213ENST00000557262 RRP36Q96EU6 259 aaKnown RBP18.36■□□□□ 0.53
TUBB3-213ENST00000557262 LZTS2Q9BRK4 669 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 SPZ1Q9BXG8 430 aa18.36■□□□□ 0.53
TUBB3-213ENST00000557262 PRC1O43663 620 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 CXCL10P02778 98 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 ICAM3P32942 547 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 MCM5P33992 734 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 KCNJ6P48051 423 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 GNAQP50148 359 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 MRPS9P82933 396 aaKnown RBP18.35■□□□□ 0.53
TUBB3-213ENST00000557262 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-213ENST00000557262 CNKSR3Q6P9H4 555 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 C16orf70Q9BSU1 422 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 MYL10Q9BUA6 226 aa18.35■□□□□ 0.53
TUBB3-213ENST00000557262 SPATA31C2B4DYI2 1134 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 NBNO60934 754 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 POU3F3P20264 500 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-213ENST00000557262 NEDD9Q14511 834 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 TRIM71Q2Q1W2 868 aaKnown RBP18.34■□□□□ 0.53
TUBB3-213ENST00000557262 ZNF618Q5T7W0 954 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 CUL5Q93034 780 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 INPP4AQ96PE3 977 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-213ENST00000557262 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
TUBB3-213ENST00000557262 BCAS3Q9H6U6 928 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 RTEL1Q9NZ71 1219 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 THEGQ9P2T0 379 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 TET1Q8NFU7 2136 aa18.34■□□□□ 0.53
TUBB3-213ENST00000557262 TANC1Q9C0D5 1861 aa18.33■□□□□ 0.53
TUBB3-213ENST00000557262 FRMPD4Q14CM0 1322 aa18.33■□□□□ 0.53
TUBB3-213ENST00000557262 ABHD14A-ACY1A0A1B0GW23 586 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 CCDC69A6NI79 296 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 H3BRB1 525 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 RFXAPO00287 272 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 TLL1O43897 1013 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 WDR5P61964 334 aaKnown RBP18.33■□□□□ 0.52
TUBB3-213ENST00000557262 MRPS5P82675 430 aaKnown RBP18.33■□□□□ 0.52
TUBB3-213ENST00000557262 TAP1Q03518 808 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 HIC1Q14526 733 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 USP17L6PQ6QN14 398 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 ASB2Q96Q27 587 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
TUBB3-213ENST00000557262 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
TUBB3-213ENST00000557262 CERS4Q9HA82 394 aa18.33■□□□□ 0.52
TUBB3-213ENST00000557262 SEC63Q9UGP8 760 aaKnown RBP18.33■□□□□ 0.52
TUBB3-213ENST00000557262 TTC28Q96AY4 2481 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 NOP56O00567 594 aaKnown RBP18.32■□□□□ 0.52
TUBB3-213ENST00000557262 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
TUBB3-213ENST00000557262 SLC27A2O14975 620 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 FIBPO43427 364 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 EFCAB14O75071 495 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 LIFRP42702 1097 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 IKBKEQ14164 716 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 NECTIN1Q15223 517 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 XRRA1Q6P2D8 792 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 TRAF7Q6Q0C0 670 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 CYFIP1Q7L576 1253 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 SRBD1Q8N5C6 995 aaKnown RBP18.32■□□□□ 0.52
TUBB3-213ENST00000557262 WNT8BQ93098 351 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
TUBB3-213ENST00000557262 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 MEIS2O14770 477 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms