RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 CD4P01730 458 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 CYP2C18P33260 490 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 ADCY7P51828 1080 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 SHHQ15465 462 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 UBE2SQ16763 222 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 WWC2Q6AWC2 1192 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 PPP1R18Q6NYC8 613 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 NFRKBQ6P4R8 1299 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 ZNF713Q8N859 430 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 EMID1Q96A84 441 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 LRCH3Q96II8 777 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 TRMT13Q9NUP7 481 aaKnown RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 FIBPO43427 364 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 PPFIA4O75335 1185 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
SYNE2-226ENST00000557084 CDC27P30260 824 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 NEDD9Q14511 834 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 C9orf50Q5SZB4 431 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 C7orf31Q8N865 590 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 KATNAL1Q9BW62 490 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
SYNE2-226ENST00000557084 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 CPLX1O14810 134 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 ZNF286BP0CG31 522 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 CYP2C9P11712 490 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 CSF2RAP15509 400 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 SP2Q02086 613 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 PTPN11Q06124 597 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 FUT2Q10981 343 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 FBXL16Q8N461 479 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 CCDC12Q8WUD4 166 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 NOC4LQ9BVI4 516 aaKnown RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 RIC8AQ9NPQ8 531 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-226ENST00000557084 PDRG1Q9NUG6 133 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 PCDHA6Q9UN73 950 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 PCDHA8Q9Y5H6 950 aa13.67□□□□□ -0.22
SYNE2-226ENST00000557084 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 STXBP3O00186 592 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 FOSP01100 380 aaPredicted RBP13.66□□□□□ -0.22
SYNE2-226ENST00000557084 SCG2P13521 617 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 ICAM3P32942 547 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 PSEN2P49810 448 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 EPHB4P54760 987 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 CCL23P55773 120 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 CCT2P78371 535 aaKnown RBP13.66□□□□□ -0.22
SYNE2-226ENST00000557084 SP4Q02446 784 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 MFSD10Q14728 455 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 PTGISQ16647 500 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 HSDL1Q3SXM5 330 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
SYNE2-226ENST00000557084 ACRP10323 421 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 PDIA3P30101 505 aaKnown RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 ZNF76P36508 570 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 BFSP2Q13515 415 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 MTMR1Q13613 665 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 CPLX2Q6PUV4 134 aaKnown RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 RPUSD2Q8IZ73 545 aaKnown RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 PHKBQ93100 1093 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 GPRASP2Q96D09 838 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 AGXT2Q9BYV1 514 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
SYNE2-226ENST00000557084 C6orf50Q9HD87 102 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 IL23AQ9NPF7 189 aa13.65□□□□□ -0.22
SYNE2-226ENST00000557084 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
SYNE2-226ENST00000557084 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
SYNE2-226ENST00000557084 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
SYNE2-226ENST00000557084 F2P00734 622 aa13.64□□□□□ -0.23
SYNE2-226ENST00000557084 KAT2BQ92831 832 aa13.64□□□□□ -0.23
SYNE2-226ENST00000557084 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms