RNA–Protein interactions for RNA: ENST00000556953.1

NGDN-212, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-212ENST00000556953 GRIN2DO15399 1336 aa13.61□□□□□ -0.23
NGDN-212ENST00000556953 PRPF3O43395 683 aaKnown RBP13.6□□□□□ -0.23
NGDN-212ENST00000556953 FIBPO43427 364 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 FOSP01100 380 aaPredicted RBP13.6□□□□□ -0.23
NGDN-212ENST00000556953 SCG2P13521 617 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 ICAM3P32942 547 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
NGDN-212ENST00000556953 ADCY7P51828 1080 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 UBE2SQ16763 222 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 PFKFB3Q16875 520 aaPredicted RBP13.6□□□□□ -0.23
NGDN-212ENST00000556953 CELF3Q5SZQ8 465 aaKnown RBP13.6□□□□□ -0.23
NGDN-212ENST00000556953 MYSM1Q5VVJ2 828 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
NGDN-212ENST00000556953 LAMA3Q16787 3333 aa13.6□□□□□ -0.23
NGDN-212ENST00000556953 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 SPATA31C2B4DYI2 1134 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 GGPS1O95749 300 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 TIMP1P01033 207 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 SUPT20HL2P0C7V6 817 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 IFNAR1P17181 557 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 UBA1P22314 1058 aaKnown RBP13.59□□□□□ -0.23
NGDN-212ENST00000556953 ITGB8P26012 769 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 CCT2P78371 535 aaKnown RBP13.59□□□□□ -0.23
NGDN-212ENST00000556953 PTPN11Q06124 597 aaPredicted RBP13.59□□□□□ -0.23
NGDN-212ENST00000556953 NEDD9Q14511 834 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 NBPF20Q3BBV1 942 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 TYW1BQ6NUM6 668 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
NGDN-212ENST00000556953 CDHR1Q96JP9 859 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 SPATA33Q96N06 139 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
NGDN-212ENST00000556953 ALDH8A1Q9H2A2 487 aaPredicted RBP13.59□□□□□ -0.23
NGDN-212ENST00000556953 MLXIPQ9HAP2 919 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
NGDN-212ENST00000556953 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 CPLX1O14810 134 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 B4GALT4O60513 344 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 PPFIA4O75335 1185 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 HOXD8P13378 290 aaPredicted RBP13.58□□□□□ -0.24
NGDN-212ENST00000556953 SP2Q02086 613 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 FPGSQ05932 587 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 AP3B2Q13367 1082 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 NTRK3Q16288 839 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 FAM47CQ5HY64 1035 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 MCTP2Q6DN12 878 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.24
NGDN-212ENST00000556953 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 GIMAP8Q8ND71 665 aaPredicted RBP13.58□□□□□ -0.24
NGDN-212ENST00000556953 PHKBQ93100 1093 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 GPRASP2Q96D09 838 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
NGDN-212ENST00000556953 MAFGO15525 162 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 GNA11P29992 359 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 PKN1Q16512 942 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 HSDL1Q3SXM5 330 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 LRIT3Q3SXY7 679 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 TMEM199Q8N511 208 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
NGDN-212ENST00000556953 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 ZMYND12Q9H0C1 365 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 TRPV6Q9H1D0 765 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
NGDN-212ENST00000556953 C6orf50Q9HD87 102 aa13.57□□□□□ -0.24
NGDN-212ENST00000556953 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
NGDN-212ENST00000556953 SLC34A2O95436 690 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 F2P00734 622 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 CLK2P49760 499 aaKnown RBP13.56□□□□□ -0.24
NGDN-212ENST00000556953 CHMP4BP1P59074 171 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
NGDN-212ENST00000556953 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■□□□□ 9.7
NGDN-212ENST00000556953 MTMR1Q13613 665 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 SESTD1Q86VW0 696 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 KAT2BQ92831 832 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 ANO3Q9BYT9 981 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 PPP1R12CQ9BZL4 782 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 UBIAD1Q9Y5Z9 338 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 MYH7BA7E2Y1 1941 aa13.56□□□□□ -0.24
NGDN-212ENST00000556953 SORBS3O60504 671 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 ZNF286BP0CG31 522 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 ITGB5P18084 799 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 SREBF1P36956 1147 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 PSEN2P49810 448 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 STK3Q13188 491 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 CYFIP1Q7L576 1253 aa13.55□□□□□ -0.24
NGDN-212ENST00000556953 REXO1Q8N1G1 1221 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms