RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TXKP42681 527 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 UBXN2AP68543 259 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 PGM5Q15124 567 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 NIPA1Q7RTP0 329 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 IGSF22Q8N9C0 903 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 ETNPPLQ8TBG4 499 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 NSUN6Q8TEA1 469 aaKnown RBP26.8■■□□□ 1.88
SIX4-203ENST00000556952 FAM20AQ96MK3 541 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 PDCD2LQ9BRP1 358 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 PYM1Q9BRP8 204 aaKnown RBP26.8■■□□□ 1.88
SIX4-203ENST00000556952 TNPO2O14787 897 aaKnown RBP26.79■■□□□ 1.88
SIX4-203ENST00000556952 EIF2AK2P19525 551 aaKnown RBP26.79■■□□□ 1.88
SIX4-203ENST00000556952 DNERQ8NFT8 737 aa26.79■■□□□ 1.88
SIX4-203ENST00000556952 EPSTI1Q96J88 318 aa26.79■■□□□ 1.88
SIX4-203ENST00000556952 CTAGE5O15320 804 aa26.78■■□□□ 1.88
SIX4-203ENST00000556952 PDIA5Q14554 519 aa26.78■■□□□ 1.88
SIX4-203ENST00000556952 USP49Q70CQ1 688 aa26.78■■□□□ 1.88
SIX4-203ENST00000556952 MXRA8Q9BRK3 442 aa26.78■■□□□ 1.88
SIX4-203ENST00000556952 TNMDQ9H2S6 317 aa26.78■■□□□ 1.88
SIX4-203ENST00000556952 TTC12Q9H892 705 aaPredicted RBP26.78■■□□□ 1.88
SIX4-203ENST00000556952 MEIS1O00470 390 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 TECP42680 631 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 PLA2G4DQ86XP0 818 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 IL31RAQ8NI17 732 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 CCSER1Q9C0I3 900 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 PCDHA12Q9UN75 941 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 GABRQQ9UN88 632 aa26.77■■□□□ 1.88
SIX4-203ENST00000556952 CCND2P30279 289 aa26.76■■□□□ 1.87
SIX4-203ENST00000556952 PRKCZQ05513 592 aa26.76■■□□□ 1.87
SIX4-203ENST00000556952 ARHGEF6Q15052 776 aa26.76■■□□□ 1.87
SIX4-203ENST00000556952 CYP2W1Q8TAV3 490 aa26.76■■□□□ 1.87
SIX4-203ENST00000556952 SRRDQ9UH36 339 aa26.76■■□□□ 1.87
SIX4-203ENST00000556952 PTPN22Q9Y2R2 807 aa26.76■■□□□ 1.87
SIX4-203ENST00000556952 ZNFX1Q9P2E3 1918 aaKnown RBP26.76■■□□□ 1.87
SIX4-203ENST00000556952 MSH4O15457 936 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 UBA7P41226 1012 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 ZNF445P59923 1031 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 IWS1Q96ST2 819 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 USP25Q9UHP3 1055 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 UBIAD1Q9Y5Z9 338 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 POTEB2H3BUK9 544 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 POLR2DO15514 142 aaKnown RBP26.75■■□□□ 1.87
SIX4-203ENST00000556952 STAM2O75886 525 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 GNRH1P01148 92 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 MAPK4P31152 587 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 MRPS9P82933 396 aaKnown RBP26.75■■□□□ 1.87
SIX4-203ENST00000556952 KCTD2Q14681 263 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 RBM43Q6ZSC3 357 aaKnown RBP26.75■■□□□ 1.87
SIX4-203ENST00000556952 GPR142Q7Z601 462 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 PURBQ96QR8 312 aaKnown RBP26.75■■□□□ 1.87
SIX4-203ENST00000556952 MMP19Q99542 508 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 ADD3Q9UEY8 706 aaKnown RBP26.75■■□□□ 1.87
SIX4-203ENST00000556952 LRWD1Q9UFC0 647 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 PTCH2Q9Y6C5 1203 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 LRRC37A2A6NM11 1700 aa26.75■■□□□ 1.87
SIX4-203ENST00000556952 NR3C2P08235 984 aa26.74■■□□□ 1.87
SIX4-203ENST00000556952 WDR78Q5VTH9 848 aa26.74■■□□□ 1.87
SIX4-203ENST00000556952 FBXO46Q6PJ61 603 aaPredicted RBP26.74■■□□□ 1.87
SIX4-203ENST00000556952 VSIG10LQ86VR7 867 aa26.74■■□□□ 1.87
SIX4-203ENST00000556952 ELOA2Q8IYF1 753 aaPredicted RBP26.74■■□□□ 1.87
SIX4-203ENST00000556952 JADE2Q9NQC1 790 aa26.74■■□□□ 1.87
SIX4-203ENST00000556952 SYCE3A1L190 88 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 FCER1AP12319 257 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 ITGB5P18084 799 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 PKN2Q16513 984 aaKnown RBP26.73■■□□□ 1.87
SIX4-203ENST00000556952 CAMK4Q16566 473 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 KRBA2Q6ZNG9 492 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 TNS4Q8IZW8 715 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 FAM133AQ8N9E0 248 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 SDF4Q9BRK5 362 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 CCDC39Q9UFE4 941 aa26.73■■□□□ 1.87
SIX4-203ENST00000556952 ZNF236Q9UL36 1845 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 MYCLP12524 364 aaPredicted RBP26.72■■□□□ 1.87
SIX4-203ENST00000556952 PLEKHH3Q7Z736 793 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 CABP7Q86V35 215 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 CNNM3Q8NE01 707 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 SLC5A5Q92911 643 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 CCDC34Q96HJ3 373 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 GJD2Q9UKL4 321 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 PLXNA1Q9UIW2 1896 aa26.72■■□□□ 1.87
SIX4-203ENST00000556952 PP2D1A8MPX8 630 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 SLC26A4O43511 780 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 HOXD10P28358 340 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 FLT3LGP49771 235 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 ALDH5A1P51649 535 aaPredicted RBP26.71■■□□□ 1.87
SIX4-203ENST00000556952 LONRF3Q496Y0 759 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 KANK3Q6NY19 840 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 PDILTQ8N807 584 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 IQUBQ8NA54 791 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 ZNF577Q9BSK1 485 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 DISC1Q9NRI5 854 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 HOOK1Q9UJC3 728 aaKnown RBP26.71■■□□□ 1.87
SIX4-203ENST00000556952 STK24Q9Y6E0 443 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 KIAA1217Q5T5P2 1943 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 DNAJC25-GNG10A0A024R161 153 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 A0A087X0B3 334 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 POTEMA6NI47 508 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 B4DLN1 442 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 CNTN2Q02246 1040 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 MTMR1Q13613 665 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms