RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 DEFB103AP81534 67 aa21.28■■□□□ 1
VIPAS39-209ENST00000556909 GRB10Q13322 594 aa21.28■■□□□ 1
VIPAS39-209ENST00000556909 KIAA0753Q2KHM9 967 aa21.28■■□□□ 1
VIPAS39-209ENST00000556909 TCTN1Q2MV58 587 aa21.28■■□□□ 1
VIPAS39-209ENST00000556909 CYB5R4Q7L1T6 521 aa21.28■■□□□ 1
VIPAS39-209ENST00000556909 DHX37Q8IY37 1157 aaKnown RBP21.28■■□□□ 1
VIPAS39-209ENST00000556909 MAD2L2Q9UI95 211 aa21.28■■□□□ 1
VIPAS39-209ENST00000556909 PALM3A6NDB9 673 aaPredicted RBP21.27■■□□□ 1
VIPAS39-209ENST00000556909 ZBTB5O15062 677 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 MYCLP12524 364 aaPredicted RBP21.27■■□□□ 1
VIPAS39-209ENST00000556909 PTK7Q13308 1070 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 TRIM71Q2Q1W2 868 aaKnown RBP21.27■■□□□ 1
VIPAS39-209ENST00000556909 TRAF7Q6Q0C0 670 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 STOX1Q6ZVD7 989 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 IL31RAQ8NI17 732 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 EXOC6Q8TAG9 804 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 WNT8BQ93098 351 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 PCDHA1Q9Y5I3 950 aa21.27■■□□□ 1
VIPAS39-209ENST00000556909 RBAK-RBAKDNI3L0D1 243 aa21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 SORBS3O60504 671 aa21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 LPXNO60711 386 aa21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 HOXA13P31271 388 aaPredicted RBP21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 PGM5Q15124 567 aa21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 SLC35G1Q2M3R5 365 aa21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 MYSM1Q5VVJ2 828 aa21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
VIPAS39-209ENST00000556909 GGPS1O95749 300 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 UBA1P22314 1058 aaKnown RBP21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 ZNF200P98182 395 aaPredicted RBP21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 HIC1Q14526 733 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 MBTPS1Q14703 1052 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 HSDL1Q3SXM5 330 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 CELF3Q5SZQ8 465 aaKnown RBP21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 KCNV1Q6PIU1 500 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 VSIG10LQ86VR7 867 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 HOMER1Q86YM7 354 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 ZBED2Q9BTP6 218 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 COG5Q9UP83 839 aa21.25■□□□□ 0.99
VIPAS39-209ENST00000556909 ABHD14A-ACY1A0A1B0GW23 586 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 GJB5O95377 273 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 GRM4Q14833 912 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 ZNF618Q5T7W0 954 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 SAMD3Q8N6K7 520 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 GDPD5Q8WTR4 605 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 SPATA33Q96N06 139 aa21.24■□□□□ 0.99
VIPAS39-209ENST00000556909 EFCAB14O75071 495 aa21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 PPFIA4O75335 1185 aa21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 SP2Q02086 613 aa21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 GPKOWQ92917 476 aaPredicted RBP eCLIP21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 PIGSQ96S52 555 aa21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 RAPGEFL1Q9UHV5 662 aa21.23■□□□□ 0.99
VIPAS39-209ENST00000556909 CCND2P30279 289 aa21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 TRDNQ13061 729 aa21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 IKBKEQ14164 716 aa21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 ZFP91Q96JP5 570 aaPredicted RBP21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 RAD9AQ99638 391 aa21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 C16orf70Q9BSU1 422 aa21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 RIOX1Q9H6W3 641 aa21.22■□□□□ 0.99
VIPAS39-209ENST00000556909 GCOM1H8Y6P7 765 aaPredicted RBP21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 CYTH3O43739 400 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 LGR5O75473 907 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 CYP21A2P08686 494 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 POLR2MP0CAP2 368 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 TGFB3P10600 412 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 SERINC5Q86VE9 423 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 HLA-CQ95604 372 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 MTUS1Q9ULD2 1270 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 NLRC5Q86WI3 1866 aa21.21■□□□□ 0.99
VIPAS39-209ENST00000556909 LINC01553A4QN01 128 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 PDE4AP27815 886 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 ERVK-21P61565 698 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 TRAF1Q13077 416 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 TTC22Q5TAA0 569 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 YTHDC1Q96MU7 727 aaKnown RBP21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 SUGCTQ9HAC7 445 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 MLXIPQ9HAP2 919 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 LMCD1Q9NZU5 365 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 FRMPD4Q14CM0 1322 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 EMSYQ7Z589 1322 aa21.2■□□□□ 0.98
VIPAS39-209ENST00000556909 KAT6AQ92794 2004 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 IFIT3O14879 490 aaKnown RBP21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 HOXC8P31273 242 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 THPOP40225 353 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 PTH1RQ03431 593 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 TROAPQ12815 778 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 MKRN4PQ13434 485 aaPredicted RBP21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 FAM117BQ6P1L5 589 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 TGS1Q96RS0 853 aaKnown RBP21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 TAF6LQ9Y6J9 622 aa21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 U3KPZ7 1027 aaPredicted RBP21.19■□□□□ 0.98
VIPAS39-209ENST00000556909 PNMA6FA0A0J9YX94 578 aa21.18■□□□□ 0.98
VIPAS39-209ENST00000556909 H3BRB1 525 aa21.18■□□□□ 0.98
VIPAS39-209ENST00000556909 LGALS2P05162 132 aa21.18■□□□□ 0.98
VIPAS39-209ENST00000556909 WTAPQ15007 396 aa21.18■□□□□ 0.98
VIPAS39-209ENST00000556909 TUT1Q9H6E5 874 aaKnown RBP21.18■□□□□ 0.98
VIPAS39-209ENST00000556909 BCAS3Q9H6U6 928 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms