RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 INSL6Q9Y581 213 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 MRVI1Q9Y6F6 885 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 KIAA1217Q5T5P2 1943 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 ZMYM6O95789 1325 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 NEDD4P46934 1319 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 H3BQ06 376 aaPredicted RBP10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 SORBS3O60504 671 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 EIF3JO75822 258 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 AMHP03971 560 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 NR3C2P08235 984 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 PCP11498 1178 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 THPOP40225 353 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 QRICH1Q2TAL8 776 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 DIEXFQ68CQ4 756 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 DGKHQ86XP1 1220 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 ESR2Q92731 530 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 MAF1Q9H063 256 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 EMSYQ7Z589 1322 aa10.55□□□□□ -0.72
HNRNPC-227ENST00000556897 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 CFBP00751 764 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 ALADP13716 330 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 PDE1AP54750 535 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 HTRA4P83105 476 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 NMIQ13287 307 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 PTPROQ16827 1216 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 EPC2Q52LR7 807 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 ANKRD45Q5TZF3 282 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 MICAL3Q7RTP6 2002 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 SERINC5Q86VE9 423 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 VAT1LQ9HCJ6 419 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 PXMP2Q9NR77 195 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 MRPL11Q9Y3B7 192 aaKnown RBP10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 CCDC171Q6TFL3 1326 aa10.54□□□□□ -0.72
HNRNPC-227ENST00000556897 MYH7BA7E2Y1 1941 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 KDM4AO75164 1064 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 RGS20O76081 388 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 MYCLP12524 364 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 PUS10Q3MIT2 529 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 HSDL1Q3SXM5 330 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 MYSM1Q5VVJ2 828 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 EP400NLQ6ZTU2 488 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 IQCA1Q86XH1 822 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 FBXO11Q86XK2 927 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 SPATA33Q96N06 139 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 YME1L1Q96TA2 773 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 KAT14Q9H8E8 782 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 CTNNA3Q9UI47 895 aa10.53□□□□□ -0.72
HNRNPC-227ENST00000556897 H3BNC9 293 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 ZNF213O14771 459 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 OPLAHO14841 1288 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 DCXO43602 365 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 UPP2O95045 317 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 GGPS1O95749 300 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 PARP1P09874 1014 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 HSD17B4P51659 736 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 TIGD5Q53EQ6 642 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 PLEKHG4Q58EX7 1191 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 TCEAL5Q5H9L2 206 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 CELF3Q5SZQ8 465 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 ENAHQ8N8S7 591 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 ANKS1AQ92625 1134 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 ATP6V0A1Q93050 837 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 ZSCAN10Q96SZ4 725 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 PDCD2LQ9BRP1 358 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 C16orf70Q9BSU1 422 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 OSBPL7Q9BZF2 842 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 MYH6P13533 1939 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 WDFY4Q6ZS81 3184 aa10.52□□□□□ -0.73
HNRNPC-227ENST00000556897 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 C17orf102A2RUQ5 167 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 B4E1Z4 1266 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 CTSHP09668 335 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 UBA1P22314 1058 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 HOXA13P31271 388 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 MRE11P49959 708 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 SP2Q02086 613 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 ZP2Q05996 745 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 GPM6BQ13491 265 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 CCDC178Q5BJE1 867 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms