RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ZDHHC14Q8IZN3 488 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 SYT8Q8NBV8 401 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 MRGPRX3Q96LB0 322 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 DEPDC7Q96QD5 511 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 SRPK1Q96SB4 655 aaKnown RBP7.58□□□□□ -1.2
HIF1A-209ENST00000556827 XYLT2Q9H1B5 865 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 BCAS3Q9H6U6 928 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 PFDN2Q9UHV9 154 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 C7orf72A4D263 438 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 IGSF3O75054 1194 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 FUCA1P04066 466 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 ATF2P15336 505 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 PMLP29590 882 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 GTF2IRD2BQ6EKJ0 949 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 GTF2IRD2Q86UP8 949 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 TRIM59Q8IWR1 403 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 BTN2A2Q8WVV5 523 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 LUC7LQ9NQ29 371 aaKnown RBP7.57□□□□□ -1.2
HIF1A-209ENST00000556827 GPRC5CQ9NQ84 441 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 RTEL1Q9NZ71 1219 aa7.57□□□□□ -1.2
HIF1A-209ENST00000556827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.57□□□□□ -1.22e-6■□□□□ 8.7
HIF1A-209ENST00000556827 ADAMTS20P59510 1910 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 ABCA9Q8IUA7 1624 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 AKNAQ7Z591 1439 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 A0A1W2PQU0 124 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 FFAR3O14843 346 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 PPP1R11O60927 126 aaPredicted RBP7.56□□□□□ -1.2
HIF1A-209ENST00000556827 GRIA2P42262 883 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 RASGRF1Q13972 1273 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 SLC9A5Q14940 896 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 SF1Q15637 639 aaKnown RBP7.56□□□□□ -1.2
HIF1A-209ENST00000556827 DPH6Q7L8W6 267 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 COPS5Q92905 334 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 BTG4Q9NY30 223 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 KIF21BO75037 1637 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 RAPGEF6Q8TEU7 1601 aa7.56□□□□□ -1.2
HIF1A-209ENST00000556827 DIAPH1O60610 1272 aaKnown RBP7.55□□□□□ -1.2
HIF1A-209ENST00000556827 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
HIF1A-209ENST00000556827 THBDP07204 575 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 MTERF2Q49AM1 385 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 EFCAB2Q5VUJ9 269 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 MBLAC2Q68D91 279 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 B3GNT8Q7Z7M8 397 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 ST13P5Q8NFI4 369 aaPredicted RBP7.55□□□□□ -1.2
HIF1A-209ENST00000556827 FNIP1Q8TF40 1166 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 DNAJC7Q99615 494 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 EPN3Q9H201 632 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 PIF1Q9H611 641 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 MARCH2Q9P0N8 246 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 FANCAO15360 1455 aa7.55□□□□□ -1.2
HIF1A-209ENST00000556827 NUP153P49790 1475 aaKnown RBP7.55□□□□□ -1.2
HIF1A-209ENST00000556827 FHOD3Q2V2M9 1422 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 FOXD2O60548 495 aaPredicted RBP7.54□□□□□ -1.2
HIF1A-209ENST00000556827 ZBTB7AO95365 584 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 NTRK1P04629 796 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 SYN1P17600 705 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 BUD31P41223 144 aaPredicted RBP7.54□□□□□ -1.2
HIF1A-209ENST00000556827 PPP2R2AP63151 447 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 CAP1Q01518 475 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 CYP4F3Q08477 520 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 ERICH6BQ5W0A0 696 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 DCP2Q8IU60 420 aaKnown RBP7.54□□□□□ -1.2
HIF1A-209ENST00000556827 TP53I13Q8NBR0 393 aaPredicted RBP7.54□□□□□ -1.2
HIF1A-209ENST00000556827 MMP19Q99542 508 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 NKX2-4Q9H2Z4 354 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
HIF1A-209ENST00000556827 KCNC1P48547 511 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 HSPA2P54652 639 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 ADGRG2Q8IZP9 1017 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 MKL1Q969V6 931 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 AP5M1Q9H0R1 490 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 SIT1Q9Y3P8 196 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 MAGI2Q86UL8 1455 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 SAMD9Q5K651 1589 aa7.53□□□□□ -1.2
HIF1A-209ENST00000556827 A0A1B0GTL3 188 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 AGRPO00253 132 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 ECI1P42126 302 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 SLURP1P55000 103 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 SSRP1Q08945 709 aaKnown RBP7.52□□□□□ -1.21
HIF1A-209ENST00000556827 IFRD2Q12894 506 aaPredicted RBP7.52□□□□□ -1.21
HIF1A-209ENST00000556827 PRSS53Q2L4Q9 553 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 VWA3BQ502W6 1294 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
HIF1A-209ENST00000556827 LIPIQ6XZB0 460 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 TEX2Q8IWB9 1127 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 SMARCC2Q8TAQ2 1214 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 SPATA9Q9BWV2 254 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 ADAM7Q9H2U9 754 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 ARHGEF4Q9NR80 690 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 SCAPERQ9BY12 1400 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 KDM2BQ8NHM5 1336 aa7.52□□□□□ -1.21
HIF1A-209ENST00000556827 PCF11O94913 1555 aaKnown RBP7.51□□□□□ -1.21
HIF1A-209ENST00000556827 CAPNS1P04632 268 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 SNRPB2P08579 225 aaKnown RBP7.51□□□□□ -1.21
HIF1A-209ENST00000556827 HTRA3P83110 453 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 CACNB2Q08289 660 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms