RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 DEXIO95424 95 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 ITGB8P26012 769 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 ST3GAL1Q11201 340 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 ITGA7Q13683 1181 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 KCNV1Q6PIU1 500 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 FAM126BQ8IXS8 530 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 STK36Q9NRP7 1315 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 STAM2O75886 525 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 CD2BP2O95400 341 aaKnown RBP25.78■■□□□ 1.72
PABPN1-206ENST00000556809 CD4P01730 458 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 MYL3P08590 195 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 TGFB3P10600 412 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 MCM2P49736 904 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 PSMC6P62333 389 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 SP2Q02086 613 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 PCNX4Q63HM2 1172 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 TEX2Q8IWB9 1127 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 CCDC12Q8WUD4 166 aaPredicted RBP25.78■■□□□ 1.72
PABPN1-206ENST00000556809 AFG1LQ8WV93 481 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 INPP4AQ96PE3 977 aaPredicted RBP25.78■■□□□ 1.72
PABPN1-206ENST00000556809 SEZ6LQ9BYH1 1024 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 TBX21Q9UL17 535 aa25.78■■□□□ 1.72
PABPN1-206ENST00000556809 KPNA6O60684 536 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 MMP3P08254 477 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 ICAM3P32942 547 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 UBE2SQ16763 222 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 BRDTQ58F21 947 aaPredicted RBP25.77■■□□□ 1.72
PABPN1-206ENST00000556809 XRRA1Q6P2D8 792 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 CCDC83Q8IWF9 413 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 NSUN7Q8NE18 718 aaKnown RBP25.77■■□□□ 1.72
PABPN1-206ENST00000556809 MTG1Q9BT17 334 aaPredicted RBP25.77■■□□□ 1.72
PABPN1-206ENST00000556809 RIC8AQ9NPQ8 531 aa25.77■■□□□ 1.72
PABPN1-206ENST00000556809 SMCO2A6NFE2 343 aa25.76■■□□□ 1.71
PABPN1-206ENST00000556809 DTNBO60941 627 aa25.76■■□□□ 1.71
PABPN1-206ENST00000556809 ADCY7P51828 1080 aa25.76■■□□□ 1.71
PABPN1-206ENST00000556809 MYSM1Q5VVJ2 828 aa25.76■■□□□ 1.71
PABPN1-206ENST00000556809 TMEM39AQ9NV64 488 aa25.76■■□□□ 1.71
PABPN1-206ENST00000556809 ESYT2A0FGR8 921 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 SPATA31C2B4DYI2 1134 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 UBA1P22314 1058 aaKnown RBP25.75■■□□□ 1.71
PABPN1-206ENST00000556809 FXR1P51114 621 aaKnown RBP eCLIP25.75■■□□□ 1.71
PABPN1-206ENST00000556809 SEMA3FQ13275 785 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 LAMC2Q13753 1193 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 CELF3Q5SZQ8 465 aaKnown RBP25.75■■□□□ 1.71
PABPN1-206ENST00000556809 CCDC148Q8NFR7 591 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 BADQ92934 168 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 LBHD1Q9BQE6 289 aaPredicted RBP25.75■■□□□ 1.71
PABPN1-206ENST00000556809 UBE2OQ9C0C9 1292 aaKnown RBP25.75■■□□□ 1.71
PABPN1-206ENST00000556809 GLT8D2Q9H1C3 349 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 SH3GLB2Q9NR46 395 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 RTEL1Q9NZ71 1219 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 VPS54Q9P1Q0 977 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 ORC3Q9UBD5 711 aaPredicted RBP25.75■■□□□ 1.71
PABPN1-206ENST00000556809 PCDHA6Q9UN73 950 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 PCDHA8Q9Y5H6 950 aa25.75■■□□□ 1.71
PABPN1-206ENST00000556809 ZMYND12Q9H0C1 365 aa25.74■■□□□ 1.71
PABPN1-206ENST00000556809 DOCK5Q9H7D0 1870 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 JAK2O60674 1132 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 HOXD8P13378 290 aaPredicted RBP25.73■■□□□ 1.71
PABPN1-206ENST00000556809 CLK2P49760 499 aaKnown RBP25.73■■□□□ 1.71
PABPN1-206ENST00000556809 GNPTABQ3T906 1256 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 DHX37Q8IY37 1157 aaKnown RBP25.73■■□□□ 1.71
PABPN1-206ENST00000556809 PPTC7Q8NI37 304 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 TMX3Q96JJ7 454 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 AIFM3Q96NN9 605 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 LLPHQ9BRT6 129 aaKnown RBP25.73■■□□□ 1.71
PABPN1-206ENST00000556809 BCAS3Q9H6U6 928 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 C6orf50Q9HD87 102 aa25.73■■□□□ 1.71
PABPN1-206ENST00000556809 SPDYE3A6NKU9 549 aa25.72■■□□□ 1.71
PABPN1-206ENST00000556809 TLR3O15455 904 aaKnown RBP25.72■■□□□ 1.71
PABPN1-206ENST00000556809 GGPS1O95749 300 aa25.72■■□□□ 1.71
PABPN1-206ENST00000556809 FDPSP14324 419 aaKnown RBP25.72■■□□□ 1.71
PABPN1-206ENST00000556809 TDHQ8IZJ6 230 aa25.72■■□□□ 1.71
PABPN1-206ENST00000556809 WASF1Q92558 559 aa25.72■■□□□ 1.71
PABPN1-206ENST00000556809 KAT2BQ92831 832 aa25.72■■□□□ 1.71
PABPN1-206ENST00000556809 FIBPO43427 364 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 B4GALT4O60513 344 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 TIMP1P01033 207 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 RAG1P15918 1043 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 GNA11P29992 359 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 DGKDQ16760 1214 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 NBPF20Q3BBV1 942 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 HSDL1Q3SXM5 330 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 FAM177A1Q8N128 213 aaPredicted RBP25.71■■□□□ 1.71
PABPN1-206ENST00000556809 TRPV6Q9H1D0 765 aa25.71■■□□□ 1.71
PABPN1-206ENST00000556809 FOSP01100 380 aaPredicted RBP25.7■■□□□ 1.7
PABPN1-206ENST00000556809 NLRP5P59047 1200 aa25.7■■□□□ 1.7
PABPN1-206ENST00000556809 NFRKBQ6P4R8 1299 aa25.7■■□□□ 1.7
PABPN1-206ENST00000556809 UBIAD1Q9Y5Z9 338 aa25.7■■□□□ 1.7
PABPN1-206ENST00000556809 PPFIA4O75335 1185 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 ITGB5P18084 799 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 PTPN11Q06124 597 aaPredicted RBP25.69■■□□□ 1.7
PABPN1-206ENST00000556809 NLRX1Q86UT6 975 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 BICD2Q8TD16 824 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 GPRASP2Q96D09 838 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 SPATA33Q96N06 139 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 SENP7Q9BQF6 1050 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 ALG1Q9BT22 464 aa25.69■■□□□ 1.7
PABPN1-206ENST00000556809 ADAMTS3O15072 1205 aa25.68■■□□□ 1.7
PABPN1-206ENST00000556809 SORBS3O60504 671 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms