RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 PKN1Q16512 942 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 UBE2SQ16763 222 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 CPLX2Q6PUV4 134 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 FAM126BQ8IXS8 530 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 DHX37Q8IY37 1157 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 PPTC7Q8NI37 304 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 PHKBQ93100 1093 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 LBHD1Q9BQE6 289 aaPredicted RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 NCOA5Q9HCD5 579 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 GRIN2DO15399 1336 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 MYH9P35579 1960 aaKnown RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 SPATA31C2B4DYI2 1134 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 MAFGO15525 162 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 MYL3P08590 195 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 UBA1P22314 1058 aaKnown RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 SP2Q02086 613 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 PTPN11Q06124 597 aaPredicted RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 NEDD9Q14511 834 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 DGKDQ16760 1214 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 CELF3Q5SZQ8 465 aaKnown RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 NLRX1Q86UT6 975 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 AFG1LQ8WV93 481 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 TRIM43Q96BQ3 446 aaPredicted RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 PRDM5Q9NQX1 630 aaPredicted RBP12.3□□□□□ -0.44
IFT43-212ENST00000556742 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 TBX21Q9UL17 535 aa12.3□□□□□ -0.44
IFT43-212ENST00000556742 CPLX1O14810 134 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 CDKL5O76039 1030 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 GGPS1O95749 300 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 GNA11P29992 359 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 AK2P54819 239 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 NFRKBQ6P4R8 1299 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 GIMAP8Q8ND71 665 aaPredicted RBP12.29□□□□□ -0.44
IFT43-212ENST00000556742 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 SLC26A6Q9BXS9 759 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 TMEM39AQ9NV64 488 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 UBIAD1Q9Y5Z9 338 aa12.29□□□□□ -0.44
IFT43-212ENST00000556742 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 PFKFB2O60825 505 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 DEXIO95424 95 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 F2P00734 622 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 TIMP1P01033 207 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 SUPT20HL2P0C7V6 817 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 RAG1P15918 1043 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 SREBF1P36956 1147 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 PSMC6P62333 389 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
IFT43-212ENST00000556742 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
IFT43-212ENST00000556742 HSDL1Q3SXM5 330 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 METTL7BQ6UX53 244 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 TDHQ8IZJ6 230 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 REXO1Q8N1G1 1221 aaKnown RBP12.28□□□□□ -0.44
IFT43-212ENST00000556742 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
IFT43-212ENST00000556742 SPATA33Q96N06 139 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 KATNAL1Q9BW62 490 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 ANO3Q9BYT9 981 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 UBE2OQ9C0C9 1292 aaKnown RBP12.28□□□□□ -0.44
IFT43-212ENST00000556742 MLXIPQ9HAP2 919 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 TPCN1Q9ULQ1 816 aa12.28□□□□□ -0.44
IFT43-212ENST00000556742 B4GALT4O60513 344 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 ITGB5P18084 799 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 NEK4P51957 841 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 SCRN1Q12765 414 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 STK3Q13188 491 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 MTMR1Q13613 665 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 MFSD5Q6N075 450 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 CRYGNQ8WXF5 182 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 KAT2BQ92831 832 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 BADQ92934 168 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
IFT43-212ENST00000556742 SLKQ9H2G2 1235 aaPredicted RBP12.27□□□□□ -0.45
IFT43-212ENST00000556742 JADE2Q9NQC1 790 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 STK36Q9NRP7 1315 aa12.27□□□□□ -0.45
IFT43-212ENST00000556742 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
IFT43-212ENST00000556742 HAS3O00219 553 aa12.26□□□□□ -0.45
IFT43-212ENST00000556742 NOP56O00567 594 aaKnown RBP12.26□□□□□ -0.45
IFT43-212ENST00000556742 CYP3A4P08684 503 aa12.26□□□□□ -0.45
IFT43-212ENST00000556742 KCNA2P16389 499 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms