RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 RIC8AQ9NPQ8 531 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 TBX21Q9UL17 535 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 PCDHA6Q9UN73 950 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 TELO2Q9Y4R8 837 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 PCDHA8Q9Y5H6 950 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 UMODL1Q5DID0 1318 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 SMCO2A6NFE2 343 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 SOX1O00570 391 aaPredicted RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 KIAA0355O15063 1070 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 TLR3O15455 904 aaKnown RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 CD4P01730 458 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 RAG1P15918 1043 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 BMP8BP34820 402 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 AK2P54819 239 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 ANAPC15P60006 121 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 BRDTQ58F21 947 aaPredicted RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 FAM47CQ5HY64 1035 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 CELF3Q5SZQ8 465 aaKnown RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 MYSM1Q5VVJ2 828 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 ANO3Q9BYT9 981 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 TRMT13Q9NUP7 481 aaKnown RBP11.9□□□□□ -0.5
SNX6-208ENST00000556712 PKD2L1Q9P0L9 805 aa11.9□□□□□ -0.5
SNX6-208ENST00000556712 SCN5AQ14524 2016 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 RBAK-RBAKDNI3L0D1 243 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 FIBPO43427 364 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 LARGE1O95461 756 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 IFNAR1P17181 557 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
SNX6-208ENST00000556712 EPHB4P54760 987 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 SP4Q02446 784 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 SCRN1Q12765 414 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 LAMC2Q13753 1193 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 GNPTABQ3T906 1256 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 JAKMIP3Q5VZ66 844 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 TDHQ8IZJ6 230 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 KAT2BQ92831 832 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 SPATA33Q96N06 139 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 RNF26Q9BY78 433 aaPredicted RBP11.89□□□□□ -0.51
SNX6-208ENST00000556712 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
SNX6-208ENST00000556712 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 VPS54Q9P1Q0 977 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 TPCN1Q9ULQ1 816 aa11.89□□□□□ -0.51
SNX6-208ENST00000556712 A0A1W2PPC1 479 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 SPATA31C2B4DYI2 1134 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 STAM2O75886 525 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 CYP2C9P11712 490 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 ITGB5P18084 799 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 ICAM3P32942 547 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 CYP2C18P33260 490 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 AKAP17AQ02040 695 aaKnown RBP11.88□□□□□ -0.51
SNX6-208ENST00000556712 FPGSQ05932 587 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 DGKDQ16760 1214 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 C9orf50Q5SZB4 431 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 KCNV1Q6PIU1 500 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
SNX6-208ENST00000556712 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 AIFM3Q96NN9 605 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
SNX6-208ENST00000556712 TRIP12Q14669 1992 aaPredicted RBP11.87□□□□□ -0.51
SNX6-208ENST00000556712 ESYT2A0FGR8 921 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 CPLX1O14810 134 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 KPNA6O60684 536 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 ATP9AO75110 1047 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 F2P00734 622 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 TIMP1P01033 207 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 TGFB3P10600 412 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 KCNA2P16389 499 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 PSEN2P49810 448 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
SNX6-208ENST00000556712 XRRA1Q6P2D8 792 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 NLRX1Q86UT6 975 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 GPRASP2Q96D09 838 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 HIPK3Q9H422 1215 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 EHMT1Q9H9B1 1298 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 UBIAD1Q9Y5Z9 338 aa11.87□□□□□ -0.51
SNX6-208ENST00000556712 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 HOXD8P13378 290 aaPredicted RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 CSF2RAP15509 400 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 SREBF1P36956 1147 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 CCL23P55773 120 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 AP3B2Q13367 1082 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 MTMR1Q13613 665 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 MFSD10Q14728 455 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 SHHQ15465 462 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 GDF6Q6KF10 455 aaPredicted RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 MFSD5Q6N075 450 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 NFRKBQ6P4R8 1299 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 METTL7BQ6UX53 244 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms