RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 PKN1Q16512 942 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 CLEC16AQ2KHT3 1053 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 SEZ6Q53EL9 994 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 KSR2Q6VAB6 950 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 PPP1R42Q7Z4L9 355 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 ERC1Q8IUD2 1116 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 PI4KAP1Q8N8J0 262 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 ABHD4Q8TB40 342 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 MYLIPQ8WY64 445 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 RILPL2Q969X0 211 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 SYTL4Q96C24 671 aaPredicted RBP4.8□□□□□ -1.64
TGFB3-205ENST00000556507 INTS4Q96HW7 963 aaKnown RBP4.8□□□□□ -1.64
TGFB3-205ENST00000556507 FAM84AQ96KN4 292 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 ASCC2Q9H1I8 757 aaPredicted RBP4.8□□□□□ -1.64
TGFB3-205ENST00000556507 C19orf44Q9H6X5 657 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 PHAXQ9H814 394 aaKnown RBP4.8□□□□□ -1.64
TGFB3-205ENST00000556507 GRPEL1Q9HAV7 217 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 UBP1Q9NZI7 540 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 GMIPQ9P107 970 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 NFAT5O94916 1531 aa4.8□□□□□ -1.64
TGFB3-205ENST00000556507 NPHP4O75161 1426 aaPredicted RBP4.8□□□□□ -1.64
TGFB3-205ENST00000556507 TTC41PQ6P2S7 1318 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 USP42Q9H9J4 1324 aaKnown RBP4.79□□□□□ -1.64
TGFB3-205ENST00000556507 UNCXA6NJT0 531 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.79□□□□□ -1.64
TGFB3-205ENST00000556507 SRGAP3O43295 1099 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 ERVFC1P60507 584 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 MESP2Q0VG99 397 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 FZD5Q13467 585 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 KLHL40Q2TBA0 621 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 GK5Q6ZS86 529 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 CNTROBQ8N137 903 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 RUFY2Q8WXA3 655 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 VWCEQ96DN2 955 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 GPATCH3Q96I76 525 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.79□□□□□ -1.64
TGFB3-205ENST00000556507 EHMT1Q9H9B1 1298 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 C9orf78Q9NZ63 289 aaPredicted RBP4.79□□□□□ -1.64
TGFB3-205ENST00000556507 CHPF2Q9P2E5 772 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 PCDHA11Q9Y5I1 949 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 MST1RQ04912 1400 aa4.79□□□□□ -1.64
TGFB3-205ENST00000556507 PLEKHG2Q9H7P9 1386 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 HEG1Q9ULI3 1381 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 MED1Q15648 1581 aaPredicted RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 UTYO14607 1347 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 SLIT3O75094 1523 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 ZNF142P52746 1687 aaPredicted RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 LMO7Q8WWI1 1683 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 FAM208AQ9UK61 1670 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 LMTK3Q96Q04 1460 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 RBM47A0AV96 593 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 SHISA3A0PJX4 238 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 HIP1O00291 1037 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 KCNQ3O43525 872 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 GLRX3O76003 335 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 UBOX5O94941 541 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 NBPF7P0C2Y1 421 aaPredicted RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 HSPA4P34932 840 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 ZNF76P36508 570 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 ZNF165P49910 485 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 RNF4P78317 190 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 CLCQ05315 142 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 CDCP2Q5VXM1 449 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 OVOS1Q6IE37 1185 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 PRR23BQ6ZRT6 265 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 KIAA0825Q8IV33 1275 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 REXO1Q8N1G1 1221 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 CLASRPQ8N2M8 674 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 LINS1Q8NG48 757 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 RAPGEF4Q8WZA2 1011 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 DHX38Q92620 1227 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 NKD1Q969G9 470 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 LRRC59Q96AG4 307 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 ATG4CQ96DT6 458 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 TMX3Q96JJ7 454 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 ORAI2Q96SN7 254 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 SPON2Q9BUD6 331 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 NT5C1AQ9BXI3 368 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 DDX21Q9NR30 783 aaKnown RBP eCLIP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 LMBRD1Q9NUN5 540 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 MAP3K2Q9Y2U5 619 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 DDX49Q9Y6V7 483 aaKnown RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 LTN1O94822 1766 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 N4BP2Q86UW6 1770 aaPredicted RBP4.78□□□□□ -1.64
TGFB3-205ENST00000556507 ADCY9O60503 1353 aa4.78□□□□□ -1.64
TGFB3-205ENST00000556507 SETD1BQ9UPS6 1966 aaKnown RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 SGSM2O43147 1006 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 HPXP02790 462 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 IFIT2P09913 472 aaKnown RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ZGLP1P0C6A0 271 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ATF3P18847 181 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF445P59923 1031 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 JAG1P78504 1218 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 G3BP1Q13283 466 aaKnown RBP eCLIP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 NMIQ13287 307 aaPredicted RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 OS9Q13438 667 aaPredicted RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 LRRFIP1Q32MZ4 808 aaKnown RBP4.77□□□□□ -1.65
TGFB3-205ENST00000556507 LDLRAD1Q5T700 205 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 NLRC3Q7RTR2 1065 aa4.77□□□□□ -1.65
TGFB3-205ENST00000556507 OXR1Q8N573 874 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms