RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
LINC01550-206ENST00000556462 ANO10Q9NW15 660 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 FBXO40Q9UH90 709 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 KIF3CO14782 793 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 NR3C2P08235 984 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 ERCC3P19447 782 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 BMP6P22004 513 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 SETQ01105 290 aaPredicted RBP12.18□□□□□ -0.46
LINC01550-206ENST00000556462 ISM2Q6H9L7 571 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 C11orf57Q6ZUT1 292 aaPredicted RBP12.18□□□□□ -0.46
LINC01550-206ENST00000556462 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 ANKRD23Q86SG2 305 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 FAM43AQ8N2R8 423 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 RASSF8Q8NHQ8 419 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
LINC01550-206ENST00000556462 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 CALML4Q96GE6 196 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 CCDC34Q96HJ3 373 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 JADE2Q9NQC1 790 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 KCNH7Q9NS40 1196 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 KBTBD4Q9NVX7 518 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 SLC25A27O95847 323 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 NLRP12P59046 1061 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 HYIQ5T013 277 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01550-206ENST00000556462 ANKRD35Q8N283 1001 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 FAM200AQ8TCP9 573 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 ZNF577Q9BSK1 485 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 BLOC1S4Q9NUP1 217 aa12.18□□□□□ -0.46
LINC01550-206ENST00000556462 ASTN1O14525 1302 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 RBBP6Q7Z6E9 1792 aaKnown RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 IPO5O00410 1097 aaKnown RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 MYCLP12524 364 aaPredicted RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 ZNF165P49910 485 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 ERVK-9P63128 1117 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 ERVK-24P63145 666 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 CNTN2Q02246 1040 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 CUL4BQ13620 913 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 TMEM119Q4V9L6 283 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 XRRA1Q6P2D8 792 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 SMARCE1Q969G3 411 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 MAN1B1Q9UKM7 699 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 PFASO15067 1338 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 EML1O00423 815 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 DHX15O43143 795 aaKnown RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 CAVIN2O95810 425 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 ZNF157P51786 506 aaPredicted RBP12.17□□□□□ -0.46
LINC01550-206ENST00000556462 PPP2R5CQ13362 524 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
LINC01550-206ENST00000556462 SLC26A4O43511 780 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 MED24O75448 989 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 RGS20O76081 388 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 SMC2O95347 1197 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 RPA1P27694 616 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 CCND2P30279 289 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 CCT6AP40227 531 aaKnown RBP12.16□□□□□ -0.46
LINC01550-206ENST00000556462 MTMR1Q13613 665 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 MORC3Q14149 939 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 IQCB1Q15051 598 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 NCAPH2Q6IBW4 605 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 LUZP1Q86V48 1076 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
LINC01550-206ENST00000556462 GTF3C2Q8WUA4 911 aaPredicted RBP12.16□□□□□ -0.46
LINC01550-206ENST00000556462 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
LINC01550-206ENST00000556462 RIT2Q99578 217 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 MAGEF1Q9HAY2 307 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
LINC01550-206ENST00000556462 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
LINC01550-206ENST00000556462 GAS7O60861 476 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 COPB2P35606 906 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 FSTL1Q12841 308 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
LINC01550-206ENST00000556462 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 RGMBQ6NW40 437 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 TRIML1Q8N9V2 468 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 IWS1Q96ST2 819 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 PORCNQ9H237 461 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 MROH8Q9H579 483 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.46
LINC01550-206ENST00000556462 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms