RNA–Protein interactions for RNA: ENST00000556334.5

PPP1R13B-213, Transcript of protein phosphatase 1 regulatory subunit 13B, humanhuman

TSL 1 (best)

Gene PPP1R13B, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R13B-213ENST00000556334 PTGISQ16647 500 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 RIOX1Q9H6W3 641 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 MTCH2Q9Y6C9 303 aa13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 TRIP12Q14669 1992 aaPredicted RBP13.21□□□□□ -0.29
PPP1R13B-213ENST00000556334 PTPRSQ13332 1948 aa13.21□□□□□ -0.3
PPP1R13B-213ENST00000556334 LCHNA4D1U4 455 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 GCOM1H8Y6P7 765 aaPredicted RBP13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 POLR2MP0CAP2 368 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 BMP1P13497 986 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 TAP1Q03518 808 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 GPNMBQ14956 572 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 GDF6Q6KF10 455 aaPredicted RBP13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 NFRKBQ6P4R8 1299 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 USP17L6PQ6QN14 398 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 Q6ZUG5 572 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 HERC6Q8IVU3 1022 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 MTMR8Q96EF0 704 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 CHD9Q3L8U1 2897 aa13.2□□□□□ -0.3
PPP1R13B-213ENST00000556334 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 ZBTB43O43298 467 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 NR3C2P08235 984 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 PFKMP08237 780 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 MMP3P08254 477 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 ACTN1P12814 892 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 CASTP20810 708 aaKnown RBP13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 DEFB103AP81534 67 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 ARHGAP1Q07960 439 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 STXBP2Q15833 593 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 UBE2SQ16763 222 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 RTN1Q16799 776 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 APOA5Q6Q788 366 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 FANCBQ8NB91 859 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 KAT2BQ92831 832 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 BRF1Q92994 677 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
PPP1R13B-213ENST00000556334 B4DLN1 442 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 DTNBO60941 627 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 REC8O95072 547 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 CALM1P0DP23 149 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 CALM2P0DP24 149 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 CALM3P0DP25 149 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 HSPA4P34932 840 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 LIFRP42702 1097 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 HSD17B4P51659 736 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 EXOSC10Q01780 885 aaKnown RBP13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 SP4Q02446 784 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 GRB10Q13322 594 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 KRT32Q14532 448 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 FAM117BQ6P1L5 589 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 RGS22Q8NE09 1264 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 WNT8BQ93098 351 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 SLC9A7Q96T83 725 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 PKD2L1Q9P0L9 805 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 HDAC6Q9UBN7 1215 aa13.18□□□□□ -0.3
PPP1R13B-213ENST00000556334 PRRC2BQ5JSZ5 2229 aaKnown RBP13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 TLL1O43897 1013 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 KPNA6O60684 536 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 NBNO60934 754 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 GH1P01241 217 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 RFC2P35250 354 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 GNAQP50148 359 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 WDR5P61964 334 aaKnown RBP13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 BFSP2Q13515 415 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 PGM5Q15124 567 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
PPP1R13B-213ENST00000556334 CUL5Q93034 780 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms