RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 VN1R5Q7Z5H4 357 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 TBC1D22AQ8WUA7 517 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 SLC7A3Q8WY07 619 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 BSNDQ8WZ55 320 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 FAM84BQ96KN1 310 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-239ENST00000556315 STK31Q9BXU1 1019 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 KCNF1Q9H3M0 494 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 MYH16Q9H6N6 1097 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-239ENST00000556315 TMOD2Q9NZR1 351 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 ADGRA2Q96PE1 1338 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 PNMA6FA0A0J9YX94 578 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 EDN3P14138 238 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 GYG1P46976 350 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 CACNB3P54284 484 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 FOXO4P98177 505 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 MOGSQ13724 837 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 CCDC57Q2TAC2 916 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 APOBEC3HQ6NTF7 200 aaKnown RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 FDX2Q6P4F2 183 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 FASTKD5Q7L8L6 764 aaKnown RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 FBXO33Q7Z6M2 555 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 TDHQ8IZJ6 230 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 SMG8Q8ND04 991 aaKnown RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 LINS1Q8NG48 757 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 FBF1Q8TES7 1133 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 ZDHHC15Q96MV8 337 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 OSMRQ99650 979 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 TMPRSS13Q9BYE2 586 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 BCL11AQ9H165 835 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 SOX17Q9H6I2 414 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 ZNF112Q9UJU3 913 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 ZMYND8Q9ULU4 1186 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-239ENST00000556315 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
ATXN3-239ENST00000556315 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ATXN3-239ENST00000556315 WDR64B1ANS9 1081 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
ATXN3-239ENST00000556315 EREGO14944 169 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 TIAF1O95411 115 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 WNT11O96014 354 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 LDHBP07195 334 aaKnown RBP6.08□□□□□ -1.44
ATXN3-239ENST00000556315 CYP2C8P10632 490 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 MAP4P27816 1152 aaKnown RBP6.08□□□□□ -1.44
ATXN3-239ENST00000556315 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-239ENST00000556315 HHIPL2Q6UWX4 724 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 LMBR1LQ6UX01 489 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 G2E3Q7L622 706 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 VPS37DQ86XT2 251 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 TSPYL6Q8N831 410 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 FAM151AQ8WW52 585 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 DNAAF4Q8WXU2 420 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 COA7Q96BR5 231 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 SUGCTQ9HAC7 445 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 SUGT1Q9Y2Z0 365 aa6.08□□□□□ -1.44
ATXN3-239ENST00000556315 CENPFP49454 3210 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 LOC100289279A0A1B0GTE1 492 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 APAF1O14727 1248 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 PRPF40AO75400 957 aaKnown RBP6.07□□□□□ -1.44
ATXN3-239ENST00000556315 FRAT2O75474 233 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-239ENST00000556315 IKBKEQ14164 716 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 SGO2Q562F6 1265 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
ATXN3-239ENST00000556315 GALNT12Q8IXK2 581 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 CCDC74AQ96AQ1 378 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 BHLHE41Q9C0J9 482 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-239ENST00000556315 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.441e-11■■■■□ 25.2
ATXN3-239ENST00000556315 C11orf49Q9H6J7 331 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 ZHX2Q9Y6X8 837 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 CEP290O15078 2479 aa6.07□□□□□ -1.44
ATXN3-239ENST00000556315 MYBBP1AQ9BQG0 1328 aaKnown RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 A0A0G2JLL6 359 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 GAS2O43903 313 aaKnown RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 DLGAP3O95886 979 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 SYN1P17600 705 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 CHAF1AQ13111 956 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 TWISTNBQ3B726 338 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 PRRT2Q7Z6L0 340 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 DIS3LQ8TF46 1054 aaKnown RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 MFSD14AQ96MC6 490 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 PICK1Q9NRD5 415 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 ADGRE2Q9UHX3 823 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 OGDHLQ9ULD0 1010 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 A0A0C4DFX4 3053 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 PSME4Q14997 1843 aa6.06□□□□□ -1.44
ATXN3-239ENST00000556315 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-239ENST00000556315 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 MAST3O60307 1309 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 MROH5Q6ZUA9 1318 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms