RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 NFATC3Q12968 1075 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 FHL2Q14192 279 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 KIAA1211LQ6NV74 962 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 Q8N1Y9 231 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 ARRDC4Q8NCT1 418 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 TRMT2BQ96GJ1 504 aaKnown RBP6.06□□□□□ -1.44
SCFD1-218ENST00000556256 CYP26B1Q9NR63 512 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 FTSJ1Q9UET6 329 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 WASF3Q9UPY6 502 aa6.06□□□□□ -1.44
SCFD1-218ENST00000556256 ARNTLO00327 626 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 BCL6P41182 706 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 CYP4F3Q08477 520 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 COL9A2Q14055 689 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-218ENST00000556256 POMZP3Q6PJE2 187 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 TEPPQ6URK8 271 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 BVESQ8NE79 360 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 NPLOC4Q8TAT6 608 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 BCL11AQ9H165 835 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 BARX1Q9HBU1 254 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-218ENST00000556256 ZNF652Q9Y2D9 606 aa6.05□□□□□ -1.44
SCFD1-218ENST00000556256 TCRBV5S2A0A599 114 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 HGSO14964 777 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-218ENST00000556256 LRG1P02750 347 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 FANCCQ00597 558 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 FOXE3Q13461 319 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 PPP2R5EQ16537 467 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 GTF2IRD2BQ6EKJ0 949 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 IQCEQ6IPM2 695 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 GTF2IRD2Q86UP8 949 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 NLRP10Q86W26 655 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 APBA2Q99767 749 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 DTLQ9NZJ0 730 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 C11orf21Q9P2W6 132 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 DDX41Q9UJV9 622 aaKnown RBP6.04□□□□□ -1.44
SCFD1-218ENST00000556256 EFR3BQ9Y2G0 817 aa6.04□□□□□ -1.44
SCFD1-218ENST00000556256 SOX9P48436 509 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 TRMT10BQ6PF06 316 aaKnown RBP6.03□□□□□ -1.44
SCFD1-218ENST00000556256 CCDC103Q8IW40 242 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 CRACR2BQ8N4Y2 399 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-218ENST00000556256 OR6P1Q8NGX9 317 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 TMEM169Q96HH4 297 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 GNRHR2Q96P88 292 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 TMEM209Q96SK2 561 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 BACH2Q9BYV9 841 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 NKX2-4Q9H2Z4 354 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 TMEFF2Q9UIK5 374 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-218ENST00000556256 ADAM29Q9UKF5 820 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 TIMELESSQ9UNS1 1208 aa6.03□□□□□ -1.44
SCFD1-218ENST00000556256 NOP56O00567 594 aaKnown RBP6.02□□□□□ -1.45
SCFD1-218ENST00000556256 TADA3O75528 432 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 TGM1P22735 817 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 TRIM59Q8IWR1 403 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 MRGPRX3Q96LB0 322 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 LGR4Q9BXB1 951 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 FBXL7Q9UJT9 491 aa6.02□□□□□ -1.45
SCFD1-218ENST00000556256 FOXS1O43638 330 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 CNOT4O95628 575 aaKnown RBP6.01□□□□□ -1.45
SCFD1-218ENST00000556256 COL6A1P12109 1028 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 GTF2A2P52657 109 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 PAK2Q13177 524 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 CHRNA2Q15822 529 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 HS1BP3Q53T59 392 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 MIIPQ5JXC2 388 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 STEAP3Q658P3 488 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 TCTN3Q6NUS6 607 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 VHLLQ6RSH7 139 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 TMC5Q6UXY8 1006 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 DIO2Q92813 273 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 WRNIP1Q96S55 665 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 SEC61A2Q9H9S3 476 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 METTL5Q9NRN9 209 aaKnown RBP6.01□□□□□ -1.45
SCFD1-218ENST00000556256 RBPJLQ9UBG7 517 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 COA3Q9Y2R0 106 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-218ENST00000556256 PCDHB4Q9Y5E5 795 aa6.01□□□□□ -1.45
SCFD1-218ENST00000556256 PRKD1Q15139 912 aaPredicted RBP6□□□□□ -1.45
SCFD1-218ENST00000556256 SMN1Q16637 294 aaKnown RBP6□□□□□ -1.45
SCFD1-218ENST00000556256 E4F1Q66K89 784 aaPredicted RBP6□□□□□ -1.45
SCFD1-218ENST00000556256 RNF207Q6ZRF8 634 aa6□□□□□ -1.45
SCFD1-218ENST00000556256 CHFRQ96EP1 664 aa6□□□□□ -1.45
SCFD1-218ENST00000556256 MYO1BO43795 1136 aa5.99□□□□□ -1.45
SCFD1-218ENST00000556256 KLHL18O94889 574 aa5.99□□□□□ -1.45
SCFD1-218ENST00000556256 CASP7P55210 303 aa5.99□□□□□ -1.45
SCFD1-218ENST00000556256 RCBTB1Q8NDN9 531 aa5.99□□□□□ -1.45
SCFD1-218ENST00000556256 ADOQ96SZ5 270 aa5.99□□□□□ -1.45
SCFD1-218ENST00000556256 PDIA4P13667 645 aaKnown RBP5.98□□□□□ -1.45
SCFD1-218ENST00000556256 NRN1LQ496H8 165 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 EMC4Q5J8M3 183 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 PHF19Q5T6S3 580 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 Q6ZUG5 572 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 KREMEN2Q8NCW0 462 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 PPP1R14AQ96A00 147 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 SHDQ96IW2 340 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 SPATA32Q96LK8 384 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 LMF1Q96S06 567 aa5.98□□□□□ -1.45
SCFD1-218ENST00000556256 GZF1Q9H116 711 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-218ENST00000556256 HSPBP1Q9NZL4 362 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms