RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ADGRE1Q14246 886 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 MFSD10Q14728 455 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 GPNMBQ14956 572 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 KIAA0753Q2KHM9 967 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 SLC35G1Q2M3R5 365 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 HSDL1Q3SXM5 330 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 PPP2R2DQ66LE6 453 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CNKSR3Q6P9H4 555 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CASC1Q6TDU7 716 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CHST3Q7LGC8 479 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 DEFB128Q7Z7B8 93 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 GIMAP8Q8ND71 665 aaPredicted RBP9□□□□□ -0.97
PTCSC3-201ENST00000556013 CTCFLQ8NI51 663 aaPredicted RBP9□□□□□ -0.97
PTCSC3-201ENST00000556013 CUL5Q93034 780 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 SPATA33Q96N06 139 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 INPP4AQ96PE3 977 aaPredicted RBP9□□□□□ -0.97
PTCSC3-201ENST00000556013 C16orf70Q9BSU1 422 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 FTOQ9C0B1 505 aaKnown RBP eCLIP9□□□□□ -0.97
PTCSC3-201ENST00000556013 LMCD1Q9NZU5 365 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 LAMA4Q16363 1823 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 H3BRB1 525 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 FIBPO43427 364 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 GTPBP6O43824 516 aaPredicted RBP8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 GGPS1O95749 300 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 GNAT1P11488 350 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 HOXC8P31273 242 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 KCNJ6P48051 423 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 ANTXR2P58335 489 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 MRPS5P82675 430 aaKnown RBP8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 SP2Q02086 613 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 IKBKEQ14164 716 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 NECTIN1Q15223 517 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 AAK1Q2M2I8 961 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 METTL7BQ6UX53 244 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 FAM43BQ6ZT52 329 aaPredicted RBP8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 HOMER1Q86YM7 354 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 HERC6Q8IVU3 1022 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 RRP36Q96EU6 259 aaKnown RBP8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 CDHR1Q96JP9 859 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 TUT1Q9H6E5 874 aaKnown RBP8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 LY9Q9HBG7 655 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 THEGQ9P2T0 379 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 RBM8AQ9Y5S9 174 aaKnown RBP8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 EMSYQ7Z589 1322 aa8.99□□□□□ -0.97
PTCSC3-201ENST00000556013 EYSQ5T1H1 3165 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 KIAA1217Q5T5P2 1943 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 MEIS2O14770 477 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 GJB5O95377 273 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 UBA1P22314 1058 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 IGFBP4P22692 258 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 HOXA13P31271 388 aaPredicted RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 RABGGTBP53611 331 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 MRPS9P82933 396 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 TRIM71Q2Q1W2 868 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 TSGA10IPQ3SY00 556 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 RPAINQ86UA6 219 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 NLRX1Q86UT6 975 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 SERINC5Q86VE9 423 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 SGMS1Q86VZ5 419 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 ZNF654Q8IZM8 581 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 USP38Q8NB14 1042 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 DHX38Q92620 1227 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 ASB2Q96Q27 587 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 RAD9AQ99638 391 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 ALG1Q9BT22 464 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 LSG1Q9H089 658 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 SENP2Q9HC62 589 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 SEC63Q9UGP8 760 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 COG5Q9UP83 839 aa8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 SPTBN5Q9NRC6 3674 aaKnown RBP8.98□□□□□ -0.97
PTCSC3-201ENST00000556013 C17orf102A2RUQ5 167 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 CCDC69A6NI79 296 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 RSPH10B2B2RC85 870 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 NOP56O00567 594 aaKnown RBP8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 TLL1O43897 1013 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 NBNO60934 754 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 LGR5O75473 907 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 RPLP2P05387 115 aaKnown RBP8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 CA3P07451 260 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 RSPH10BP0C881 870 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 MYOGP15173 224 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 WDR5P61964 334 aaKnown RBP8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 TAP1Q03518 808 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 BMP2KLQ5H9B9 411 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 ZNF618Q5T7W0 954 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 FANCBQ8NB91 859 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 TET1Q8NFU7 2136 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 SMARCC2Q8TAQ2 1214 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 TNPO1Q92973 898 aaKnown RBP8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 GPRASP2Q96D09 838 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 ESYT1Q9BSJ8 1104 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 RNPEPQ9H4A4 650 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 PSTPIP2Q9H939 334 aa8.97□□□□□ -0.97
PTCSC3-201ENST00000556013 MTCH2Q9Y6C9 303 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms