RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 PGM5Q15124 567 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 CELF3Q5SZQ8 465 aaKnown RBP20.54■□□□□ 0.88
NPC2-208ENST00000556009 LRRC8DQ7L1W4 858 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 NCOA7Q8NI08 942 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 PIGSQ96S52 555 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 E7EWF7 191 aa20.53■□□□□ 0.88
NPC2-208ENST00000556009 GCOM1H8Y6P7 765 aaPredicted RBP20.53■□□□□ 0.88
NPC2-208ENST00000556009 CYTH3O43739 400 aa20.53■□□□□ 0.88
NPC2-208ENST00000556009 POLR2MP0CAP2 368 aa20.53■□□□□ 0.88
NPC2-208ENST00000556009 CKBP12277 381 aa20.53■□□□□ 0.88
NPC2-208ENST00000556009 HOXA13P31271 388 aaPredicted RBP20.53■□□□□ 0.88
NPC2-208ENST00000556009 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
NPC2-208ENST00000556009 KIAA0753Q2KHM9 967 aa20.53■□□□□ 0.88
NPC2-208ENST00000556009 TSPYL2Q9H2G4 693 aaPredicted RBP20.53■□□□□ 0.88
NPC2-208ENST00000556009 TNFRSF10AO00220 468 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 ARHGEF15O94989 841 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 TAP1Q03518 808 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 WTAPQ15007 396 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 TRIM71Q2Q1W2 868 aaKnown RBP20.52■□□□□ 0.88
NPC2-208ENST00000556009 HSDL1Q3SXM5 330 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 CNKSR3Q6P9H4 555 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.88
NPC2-208ENST00000556009 HOMER1Q86YM7 354 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 MAP4K1Q92918 833 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 ALG1Q9BT22 464 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 SENP2Q9HC62 589 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 XIRP2A4UGR9 3374 aa20.52■□□□□ 0.88
NPC2-208ENST00000556009 SGSM2O43147 1006 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 GGPS1O95749 300 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 CCND2P30279 289 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 KCNJ6P48051 423 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 SP2Q02086 613 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 IGDCC4Q8TDY8 1250 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 SPATA33Q96N06 139 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 MTCH2Q9Y6C9 303 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 TAF6LQ9Y6J9 622 aa20.51■□□□□ 0.87
NPC2-208ENST00000556009 MICAL3Q7RTP6 2002 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 ABHD14A-ACY1A0A1B0GW23 586 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 EPOPA6NHQ4 379 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 RFXAPO00287 272 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 GTPBP6O43824 516 aaPredicted RBP20.5■□□□□ 0.87
NPC2-208ENST00000556009 NBNO60934 754 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 EFCAB14O75071 495 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 ZNF286BP0CG31 522 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 WDR5P61964 334 aaKnown RBP20.5■□□□□ 0.87
NPC2-208ENST00000556009 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
NPC2-208ENST00000556009 TRAF7Q6Q0C0 670 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 CATIPQ7Z7H3 387 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 FCHSD1Q86WN1 690 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 C16orf70Q9BSU1 422 aa20.5■□□□□ 0.87
NPC2-208ENST00000556009 SIP14410 1827 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 TLL1O43897 1013 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 STAM2O75886 525 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 UBA1P22314 1058 aaKnown RBP20.49■□□□□ 0.87
NPC2-208ENST00000556009 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 ICAM3P32942 547 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 MICALL1Q8N3F8 863 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 MTA3Q9BTC8 594 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 CERS4Q9HA82 394 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 MLXIPQ9HAP2 919 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 FRMPD4Q14CM0 1322 aa20.49■□□□□ 0.87
NPC2-208ENST00000556009 ANTXR2P58335 489 aa20.48■□□□□ 0.87
NPC2-208ENST00000556009 HIC1Q14526 733 aa20.48■□□□□ 0.87
NPC2-208ENST00000556009 SPRED2Q7Z698 418 aa20.48■□□□□ 0.87
NPC2-208ENST00000556009 SERINC5Q86VE9 423 aa20.48■□□□□ 0.87
NPC2-208ENST00000556009 MB21D2Q8IYB1 491 aaPredicted RBP20.48■□□□□ 0.87
NPC2-208ENST00000556009 ADAMTS19Q8TE59 1207 aa20.48■□□□□ 0.87
NPC2-208ENST00000556009 ARNTL2Q8WYA1 636 aa20.48■□□□□ 0.87
NPC2-208ENST00000556009 INPP4AQ96PE3 977 aaPredicted RBP20.48■□□□□ 0.87
NPC2-208ENST00000556009 HOXC8P31273 242 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 MRPS9P82933 396 aaKnown RBP20.47■□□□□ 0.87
NPC2-208ENST00000556009 ZNF200P98182 395 aaPredicted RBP20.47■□□□□ 0.87
NPC2-208ENST00000556009 IKBKEQ14164 716 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 AAK1Q2M2I8 961 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 TCTN1Q2MV58 587 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 GNPTABQ3T906 1256 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 ZNF618Q5T7W0 954 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 GPKOWQ92917 476 aaPredicted RBP eCLIP20.47■□□□□ 0.87
NPC2-208ENST00000556009 WNT8BQ93098 351 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 RAD9AQ99638 391 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 SPZ1Q9BXG8 430 aa20.47■□□□□ 0.87
NPC2-208ENST00000556009 SPATA31C2B4DYI2 1134 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 H3BRB1 525 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 GJB5O95377 273 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 BMP1P13497 986 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 NEDD9Q14511 834 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 MBTPS1Q14703 1052 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 KRT40Q6A162 431 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 XRRA1Q6P2D8 792 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 TMCO2Q7Z6W1 182 aaPredicted RBP20.46■□□□□ 0.87
NPC2-208ENST00000556009 ZFP91Q96JP5 570 aaPredicted RBP20.46■□□□□ 0.87
NPC2-208ENST00000556009 ZBED2Q9BTP6 218 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 USP26Q9BXU7 913 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 TUT1Q9H6E5 874 aaKnown RBP20.46■□□□□ 0.87
NPC2-208ENST00000556009 LMCD1Q9NZU5 365 aa20.46■□□□□ 0.87
NPC2-208ENST00000556009 SORBS3O60504 671 aa20.45■□□□□ 0.86
NPC2-208ENST00000556009 LGR5O75473 907 aa20.45■□□□□ 0.86
NPC2-208ENST00000556009 DDAH1O94760 285 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms