RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 PPFIA4O75335 1185 aa26.14■■□□□ 1.78
CDKN3-208ENST00000555837 MYL3P08590 195 aa26.14■■□□□ 1.78
CDKN3-208ENST00000555837 MRPS9P82933 396 aaKnown RBP26.14■■□□□ 1.78
CDKN3-208ENST00000555837 SCRN1Q12765 414 aa26.14■■□□□ 1.78
CDKN3-208ENST00000555837 TRIM60Q495X7 471 aa26.14■■□□□ 1.78
CDKN3-208ENST00000555837 CELF3Q5SZQ8 465 aaKnown RBP26.14■■□□□ 1.78
CDKN3-208ENST00000555837 IL31RAQ8NI17 732 aa26.14■■□□□ 1.78
CDKN3-208ENST00000555837 LARP6Q9BRS8 491 aaKnown RBP26.14■■□□□ 1.78
CDKN3-208ENST00000555837 ANO3Q9BYT9 981 aa26.14■■□□□ 1.78
CDKN3-208ENST00000555837 NOP56O00567 594 aaKnown RBP26.13■■□□□ 1.77
CDKN3-208ENST00000555837 ARIH2O95376 493 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 ZNF76P36508 570 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 ARHGAP1Q07960 439 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 MTMR1Q13613 665 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 ITGA7Q13683 1181 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 TYW1BQ6NUM6 668 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 RTEL1Q9NZ71 1219 aa26.13■■□□□ 1.77
CDKN3-208ENST00000555837 PQBP1O60828 265 aaKnown RBP26.12■■□□□ 1.77
CDKN3-208ENST00000555837 GGPS1O95749 300 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 CLTBP09497 229 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 SUPT20HL2P0C7V6 817 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 SREBF1P36956 1147 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 CLK2P49760 499 aaKnown RBP26.12■■□□□ 1.77
CDKN3-208ENST00000555837 PURAQ00577 322 aaKnown RBP26.12■■□□□ 1.77
CDKN3-208ENST00000555837 TLE2Q04725 743 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 PTPN11Q06124 597 aaPredicted RBP26.12■■□□□ 1.77
CDKN3-208ENST00000555837 MYSM1Q5VVJ2 828 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 AFG1LQ8WV93 481 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 GTF3C6Q969F1 213 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 SPATA33Q96N06 139 aa26.12■■□□□ 1.77
CDKN3-208ENST00000555837 SH2B1Q9NRF2 756 aaPredicted RBP26.12■■□□□ 1.77
CDKN3-208ENST00000555837 RGS20O76081 388 aa26.11■■□□□ 1.77
CDKN3-208ENST00000555837 MMP3P08254 477 aa26.11■■□□□ 1.77
CDKN3-208ENST00000555837 METTL7BQ6UX53 244 aa26.11■■□□□ 1.77
CDKN3-208ENST00000555837 COPS5Q92905 334 aa26.11■■□□□ 1.77
CDKN3-208ENST00000555837 JADE2Q9NQC1 790 aa26.11■■□□□ 1.77
CDKN3-208ENST00000555837 UBA1P22314 1058 aaKnown RBP26.1■■□□□ 1.77
CDKN3-208ENST00000555837 CDK7P50613 346 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 NFRKBQ6P4R8 1299 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 NIPA1Q7RTP0 329 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 BRMS1Q9HCU9 246 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 PRDM5Q9NQX1 630 aaPredicted RBP26.1■■□□□ 1.77
CDKN3-208ENST00000555837 TMEM39AQ9NV64 488 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 VPS54Q9P1Q0 977 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 UBIAD1Q9Y5Z9 338 aa26.1■■□□□ 1.77
CDKN3-208ENST00000555837 MCM2P49736 904 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 CEP55Q53EZ4 464 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 TMEM63BQ5T3F8 832 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 JAKMIP3Q5VZ66 844 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 SLC43A3Q8NBI5 491 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 MXRA8Q9BRK3 442 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 ZMYND8Q9ULU4 1186 aaPredicted RBP26.09■■□□□ 1.77
CDKN3-208ENST00000555837 PCDHA4Q9UN74 947 aa26.09■■□□□ 1.77
CDKN3-208ENST00000555837 A0A1W2PPC1 479 aa26.08■■□□□ 1.77
CDKN3-208ENST00000555837 ARHGAP4P98171 946 aa26.08■■□□□ 1.77
CDKN3-208ENST00000555837 SETQ01105 290 aaPredicted RBP26.08■■□□□ 1.77
CDKN3-208ENST00000555837 TRIM29Q14134 588 aa26.08■■□□□ 1.77
CDKN3-208ENST00000555837 ME3Q16798 604 aa26.08■■□□□ 1.77
CDKN3-208ENST00000555837 SDF4Q9BRK5 362 aa26.08■■□□□ 1.77
CDKN3-208ENST00000555837 LLPHQ9BRT6 129 aaKnown RBP26.08■■□□□ 1.77
CDKN3-208ENST00000555837 ORC3Q9UBD5 711 aaPredicted RBP26.08■■□□□ 1.77
CDKN3-208ENST00000555837 TCEAL9Q9UHQ7 104 aa26.08■■□□□ 1.77
CDKN3-208ENST00000555837 CYP3A4P08684 503 aa26.07■■□□□ 1.76
CDKN3-208ENST00000555837 IRX5P78411 483 aaPredicted RBP26.07■■□□□ 1.76
CDKN3-208ENST00000555837 DAGLBQ8NCG7 672 aa26.07■■□□□ 1.76
CDKN3-208ENST00000555837 ALPK3Q96L96 1907 aa26.07■■□□□ 1.76
CDKN3-208ENST00000555837 KIAA0355O15063 1070 aa26.06■■□□□ 1.76
CDKN3-208ENST00000555837 RAG1P15918 1043 aa26.06■■□□□ 1.76
CDKN3-208ENST00000555837 BMP8BP34820 402 aa26.06■■□□□ 1.76
CDKN3-208ENST00000555837 USP11P51784 963 aa26.06■■□□□ 1.76
CDKN3-208ENST00000555837 BLIDQ8IZY5 108 aa26.06■■□□□ 1.76
CDKN3-208ENST00000555837 TNPO1Q92973 898 aaKnown RBP26.06■■□□□ 1.76
CDKN3-208ENST00000555837 PDLIM7Q9NR12 457 aa26.06■■□□□ 1.76
CDKN3-208ENST00000555837 ZNF215Q9UL58 517 aaPredicted RBP26.06■■□□□ 1.76
CDKN3-208ENST00000555837 HOXD8P13378 290 aaPredicted RBP26.05■■□□□ 1.76
CDKN3-208ENST00000555837 SYN1P17600 705 aa26.05■■□□□ 1.76
CDKN3-208ENST00000555837 ITGB5P18084 799 aa26.05■■□□□ 1.76
CDKN3-208ENST00000555837 CYFIP1Q7L576 1253 aa26.05■■□□□ 1.76
CDKN3-208ENST00000555837 FAM126BQ8IXS8 530 aa26.05■■□□□ 1.76
CDKN3-208ENST00000555837 TMEM260Q9NX78 707 aa26.05■■□□□ 1.76
CDKN3-208ENST00000555837 KIF3AQ9Y496 699 aa26.05■■□□□ 1.76
CDKN3-208ENST00000555837 PPFIA3O75145 1194 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 HMGN5P82970 282 aaKnown RBP26.04■■□□□ 1.76
CDKN3-208ENST00000555837 SP2Q02086 613 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 FAAP100Q0VG06 881 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 FAM47CQ5HY64 1035 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 KRT25Q7Z3Z0 450 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 C7orf31Q8N865 590 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 NAP1L4Q99733 375 aaKnown RBP26.04■■□□□ 1.76
CDKN3-208ENST00000555837 KCNH7Q9NS40 1196 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 NOD1Q9Y239 953 aa26.04■■□□□ 1.76
CDKN3-208ENST00000555837 MEIS1O00470 390 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 NBPF20Q3BBV1 942 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 HSDL1Q3SXM5 330 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 CHRDL2Q6WN34 429 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 SESTD1Q86VW0 696 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 NECAB1Q8N987 351 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 ZFP91Q96JP5 570 aaPredicted RBP26.03■■□□□ 1.76
CDKN3-208ENST00000555837 TBC1D32Q96NH3 1257 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 ALG1Q9BT22 464 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms