RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 KAT2BQ92831 832 aa23.55■■□□□ 1.36
VTI1B-205ENST00000555543 PHKBQ93100 1093 aa23.55■■□□□ 1.36
VTI1B-205ENST00000555543 SEZ6LQ9BYH1 1024 aa23.55■■□□□ 1.36
VTI1B-205ENST00000555543 RIC8AQ9NPQ8 531 aa23.55■■□□□ 1.36
VTI1B-205ENST00000555543 MYH7BA7E2Y1 1941 aa23.55■■□□□ 1.36
VTI1B-205ENST00000555543 TIMP1P01033 207 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 TGFB3P10600 412 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 ICAM3P32942 547 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 PKN1Q16512 942 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 HSDL1Q3SXM5 330 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 GNPTABQ3T906 1256 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 C9orf50Q5SZB4 431 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 LRCH3Q96II8 777 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 PPP1R12CQ9BZL4 782 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 TRMT13Q9NUP7 481 aaKnown RBP23.54■■□□□ 1.36
VTI1B-205ENST00000555543 PCDHA6Q9UN73 950 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 PCDHA8Q9Y5H6 950 aa23.54■■□□□ 1.36
VTI1B-205ENST00000555543 SPATA31C2B4DYI2 1134 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 SEC24BO95487 1268 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 SCG2P13521 617 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 ADCY7P51828 1080 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 DGKDQ16760 1214 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 XRRA1Q6P2D8 792 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 PGBD1Q96JS3 809 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 PDRG1Q9NUG6 133 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 UMODL1Q5DID0 1318 aa23.53■■□□□ 1.36
VTI1B-205ENST00000555543 DOCK5Q9H7D0 1870 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 SMCO2A6NFE2 343 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 SPDYE3A6NKU9 549 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 PRPF3O43395 683 aaKnown RBP23.52■■□□□ 1.36
VTI1B-205ENST00000555543 FIBPO43427 364 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 ZNF286BP0CG31 522 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 HOXD8P13378 290 aaPredicted RBP23.52■■□□□ 1.36
VTI1B-205ENST00000555543 CYP2C18P33260 490 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 CHMP4BP1P59074 171 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 FPGSQ05932 587 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 SHHQ15465 462 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 LRIT3Q3SXY7 679 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 FAM47CQ5HY64 1035 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 SPATA33Q96N06 139 aa23.52■■□□□ 1.36
VTI1B-205ENST00000555543 ADAMTS3O15072 1205 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 IFNAR1P17181 557 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 ITGB5P18084 799 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 MFSD5Q6N075 450 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 NFRKBQ6P4R8 1299 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 NOC4LQ9BVI4 516 aaKnown RBP23.51■■□□□ 1.35
VTI1B-205ENST00000555543 HIPK3Q9H422 1215 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 TMEM260Q9NX78 707 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 TELO2Q9Y4R8 837 aa23.51■■□□□ 1.35
VTI1B-205ENST00000555543 CYP2C9P11712 490 aa23.5■■□□□ 1.35
VTI1B-205ENST00000555543 CLK2P49760 499 aaKnown RBP23.5■■□□□ 1.35
VTI1B-205ENST00000555543 ANAPC15P60006 121 aa23.5■■□□□ 1.35
VTI1B-205ENST00000555543 ZNF274Q96GC6 653 aaPredicted RBP23.5■■□□□ 1.35
VTI1B-205ENST00000555543 SLC26A6Q9BXS9 759 aa23.5■■□□□ 1.35
VTI1B-205ENST00000555543 RNF26Q9BY78 433 aaPredicted RBP23.5■■□□□ 1.35
VTI1B-205ENST00000555543 MLXIPQ9HAP2 919 aa23.5■■□□□ 1.35
VTI1B-205ENST00000555543 UBIAD1Q9Y5Z9 338 aa23.5■■□□□ 1.35
VTI1B-205ENST00000555543 F2P00734 622 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 CSF2RAP15509 400 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 STK3Q13188 491 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 CYFIP1Q7L576 1253 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 NLRX1Q86UT6 975 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 GPRASP2Q96D09 838 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 IL17RAQ96F46 866 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 ANO3Q9BYT9 981 aa23.49■■□□□ 1.35
VTI1B-205ENST00000555543 PSEN2P49810 448 aa23.48■■□□□ 1.35
VTI1B-205ENST00000555543 PTPN11Q06124 597 aaPredicted RBP23.48■■□□□ 1.35
VTI1B-205ENST00000555543 NEDD9Q14511 834 aa23.48■■□□□ 1.35
VTI1B-205ENST00000555543 METTL7BQ6UX53 244 aa23.48■■□□□ 1.35
VTI1B-205ENST00000555543 TEX2Q8IWB9 1127 aa23.48■■□□□ 1.35
VTI1B-205ENST00000555543 CTAGE1Q96RT6 745 aa23.48■■□□□ 1.35
VTI1B-205ENST00000555543 WNT8AQ9H1J5 351 aa23.48■■□□□ 1.35
VTI1B-205ENST00000555543 ESYT2A0FGR8 921 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 HAS3O00219 553 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 ATP9AO75110 1047 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 PPFIA4O75335 1185 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 KCNA2P16389 499 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 MFSD10Q14728 455 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 C16orf59Q7L2K0 433 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 SENP7Q9BQF6 1050 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 ALG1Q9BT22 464 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 ZMYND12Q9H0C1 365 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 EHMT1Q9H9B1 1298 aa23.47■■□□□ 1.35
VTI1B-205ENST00000555543 FOSP01100 380 aaPredicted RBP23.46■■□□□ 1.35
VTI1B-205ENST00000555543 SUPT20HL2P0C7V6 817 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 CCL23P55773 120 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 AKAP17AQ02040 695 aaKnown RBP23.46■■□□□ 1.35
VTI1B-205ENST00000555543 AP3B2Q13367 1082 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 KIAA0753Q2KHM9 967 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 JAKMIP3Q5VZ66 844 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 GDF6Q6KF10 455 aaPredicted RBP23.46■■□□□ 1.35
VTI1B-205ENST00000555543 SESTD1Q86VW0 696 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 TMEM199Q8N511 208 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 CYP2W1Q8TAV3 490 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 GPR20Q99678 358 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 C16orf70Q9BSU1 422 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 GLT8D2Q9H1C3 349 aa23.46■■□□□ 1.35
VTI1B-205ENST00000555543 LGALS2P05162 132 aa23.45■■□□□ 1.34
VTI1B-205ENST00000555543 SREBF1P36956 1147 aa23.45■■□□□ 1.34
VTI1B-205ENST00000555543 SP4Q02446 784 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms