RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TNFAIP2Q03169 654 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 BLIDQ8IZY5 108 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 SAMD3Q8N6K7 520 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 BICD2Q8TD16 824 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 U2AF1L4Q8WU68 220 aaKnown RBP11.22□□□□□ -0.61
PSEN1-213ENST00000555386 C8orf76Q96K31 380 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 IWS1Q96ST2 819 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 KATNBL1Q9H079 304 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 GLT8D2Q9H1C3 349 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 SH3GLB2Q9NR46 395 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
PSEN1-213ENST00000555386 PCDHA4Q9UN74 947 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 ESYT2A0FGR8 921 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 ADCY6O43306 1168 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 GADD45BO75293 160 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-213ENST00000555386 PGK1P00558 417 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 IGHA2P01877 340 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 GJB1P08034 283 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 RARBP10826 455 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 AKR1A1P14550 325 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 EDNRBP24530 442 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-213ENST00000555386 HMGN5P82970 282 aaKnown RBP11.21□□□□□ -0.61
PSEN1-213ENST00000555386 UVSSAQ2YD98 709 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 KRT40Q6A162 431 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 COPS5Q92905 334 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 WDR11Q9BZH6 1224 aa11.21□□□□□ -0.61
PSEN1-213ENST00000555386 PAK6Q9NQU5 681 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-213ENST00000555386 VPS37CA5D8V6 355 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 EIF3JO75822 258 aaKnown RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 SGPL1O95470 568 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 FOSP01100 380 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 SMPD1P17405 629 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 KRT2P35908 639 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 CLK2P49760 499 aaKnown RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 KRT85P78386 507 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 NR5A1Q13285 461 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 GNL2Q13823 731 aaKnown RBP11.2□□□□□ -0.62
PSEN1-213ENST00000555386 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 MAF1Q9H063 256 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 XPNPEP3Q9NQH7 507 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 MRVI1Q9Y6F6 885 aa11.2□□□□□ -0.62
PSEN1-213ENST00000555386 CCDC194A0A1B0GVG4 234 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 FAM205CA6NFA0 338 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 ARIH2O95376 493 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 TXNP10599 105 aaKnown RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 ARHGAP4P98171 946 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 BEX3Q00994 111 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 SP4Q02446 784 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 AP3B2Q13367 1082 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 TTLL4Q14679 1199 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 PCNX4Q63HM2 1172 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 LHX8Q68G74 356 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 PIK3AP1Q6ZUJ8 805 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 DIS3L2Q8IYB7 885 aaKnown RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 AP5M1Q9H0R1 490 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 GDPD2Q9HCC8 539 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 NRBP1Q9UHY1 535 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 MYADML2A6NDP7 307 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 H3BQV1 296 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 MSCO60682 206 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 RGS20O76081 388 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 MMP1P03956 469 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 GJA8P48165 433 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 CHMP4BP1P59074 171 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 DNM1Q05193 864 aaKnown RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 NPY5RQ15761 445 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 INF2Q27J81 1249 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 IQSEC1Q6DN90 963 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 TLK2Q86UE8 772 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 ZSCAN30Q86W11 494 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 TBCKQ8TEA7 893 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 DIS3LQ8TF46 1054 aaKnown RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 FERMT2Q96AC1 680 aa11.19□□□□□ -0.62
PSEN1-213ENST00000555386 ZSCAN16Q9H4T2 348 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-213ENST00000555386 SYNRGQ9UMZ2 1314 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 LOC102724159A0A0B4J2E5 919 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 FIBPO43427 364 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms