RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 C5P01031 1676 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 ANO9A1A5B4 782 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 KCNQ4P56696 695 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 KCNJ2P63252 427 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 RNASELQ05823 741 aaKnown RBP9.77□□□□□ -0.85
SYNE2-217ENST00000555022 TNIP1Q15025 636 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
SYNE2-217ENST00000555022 TRMT1LQ7Z2T5 733 aaKnown RBP9.77□□□□□ -0.85
SYNE2-217ENST00000555022 DAAM2Q86T65 1068 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 RETREG2Q8NC44 543 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 KIAA0895Q8NCT3 520 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 ZBTB1Q9Y2K1 713 aa9.77□□□□□ -0.85
SYNE2-217ENST00000555022 KRIT1O00522 736 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 AP1G2O75843 785 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 FECHP22830 423 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 SMTNP53814 917 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 SKOR1P84550 965 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 SNX1Q13596 522 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 AADACL2Q6P093 401 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 GJB7Q6PEY0 223 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 NLRP10Q86W26 655 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 GDAP1Q8TB36 358 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 PARD3BQ8TEW8 1205 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 MRRFQ96E11 262 aaKnown RBP9.76□□□□□ -0.85
SYNE2-217ENST00000555022 RNF41Q9H4P4 317 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-217ENST00000555022 PRDM11Q9NQV5 511 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 NR2E1Q9Y466 385 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 MYO5AQ9Y4I1 1855 aaKnown RBP9.76□□□□□ -0.85
SYNE2-217ENST00000555022 CNTNAP5Q8WYK1 1306 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 CCNE1P24864 410 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 MMP14P50281 582 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 KLHL30Q0D2K2 578 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 TROAPQ12815 778 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 SEC23AQ15436 765 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 MEA1Q16626 185 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 VWA3BQ502W6 1294 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 DCAF17Q5H9S7 520 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-217ENST00000555022 CCDC63Q8NA47 563 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 ZBTB38Q8NAP3 1195 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-217ENST00000555022 DYDC1Q8WWB3 177 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
SYNE2-217ENST00000555022 TTYH3Q9C0H2 523 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
SYNE2-217ENST00000555022 H0Y3Z8 333 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 PRPF3O43395 683 aaKnown RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 CAND2O75155 1236 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 RASSF9O75901 435 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 PDHA1P08559 390 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 KRT13P13646 458 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 GCFC2P16383 781 aaKnown RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 KLRK1P26718 216 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 FUT2Q10981 343 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 GKAP1Q5VSY0 366 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 SEPT14Q6ZU15 432 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 GLG1Q92896 1179 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 SGSM3Q96HU1 749 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 FAXDC2Q96IV6 333 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 PAIP2Q9BPZ3 127 aaKnown RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 NUDT12Q9BQG2 462 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 TSGA10Q9BZW7 698 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 THAP9Q9H5L6 903 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 TCP11L1Q9NUJ3 509 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 CCDC189A1A4V9 331 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 NAPAP54920 295 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 IFI35P80217 286 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 KCNB1Q14721 858 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 RPS6KA1Q15418 735 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 EAPPQ56P03 285 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 MSL3Q8N5Y2 521 aaKnown RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 ISCA1Q9BUE6 129 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 TRIM9Q9C026 710 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 IKZF4Q9H2S9 585 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 AZI2Q9H6S1 392 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 PANK4Q9NVE7 773 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 MCM9Q9NXL9 1143 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 TMOD3Q9NYL9 352 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 SNX24Q9Y343 169 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-217ENST00000555022 ABCC12Q96J65 1359 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 C4AP0C0L4 1744 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 C4BP0C0L5 1744 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 UQCRFS1P1P0C7P4 283 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 PLTPP55058 493 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 LRRC34Q8IZ02 419 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 WDR19Q8NEZ3 1342 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 MYH6P13533 1939 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 RTL9Q8NET4 1388 aa9.75□□□□□ -0.85
SYNE2-217ENST00000555022 A0A1B0GUA9 196 aa9.74□□□□□ -0.85
SYNE2-217ENST00000555022 A0A1W2PQC6 194 aa9.74□□□□□ -0.85
SYNE2-217ENST00000555022 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
SYNE2-217ENST00000555022 SART1O43290 800 aaKnown RBP9.74□□□□□ -0.85
SYNE2-217ENST00000555022 TLR2O60603 784 aa9.74□□□□□ -0.85
SYNE2-217ENST00000555022 MMEP08473 750 aa9.74□□□□□ -0.85
SYNE2-217ENST00000555022 CHN1P15882 459 aa9.74□□□□□ -0.85
SYNE2-217ENST00000555022 SESN3P58005 492 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms