RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	MYO1B	O43795	1136 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	IL1R1	P14778	569 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	CDC27	P30260	824 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	PHKA1	P46020	1223 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	CFAP100	Q494V2	611 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	CCDC158	Q5M9N0	1113 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	CEP85	Q6P2H3	762 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	AACS	Q86V21	672 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	TP53INP2	Q8IXH6	220 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	FBXL6	Q8N531	539 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	TDRD7	Q8NHU6	1098 aa	Known RBP	5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	SSH3	Q8TE77	659 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	ANKS1A	Q92625	1134 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	ASIC4	Q96FT7	647 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	ZNF576	Q9H609	170 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	IL1RAPL2	Q9NP60	686 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	ZCCHC17	Q9NP64	241 aa	Known RBP	5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	ARAP2	Q8WZ64	1704 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	BAHCC1	Q9P281	2608 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	MYO3B	Q8WXR4	1341 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	LTBP2	Q14767	1821 aa		5.67	□□□□□ -1.5
ATXN3-231	ENST00000554994	MGAM	O43451	1857 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	FSCN2	O14926	492 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	SMARCA5	O60264	1052 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	LDHB	P07195	334 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	IFIT2	P09913	472 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	COL6A1	P12109	1028 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	CAPN2	P17655	700 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	FGFR2	P21802	821 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	PREP	P48147	710 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	DPYD	Q12882	1025 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	HSP90AB4P	Q58FF6	505 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	AKNAD1	Q5T1N1	836 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	FAM117B	Q6P1L5	589 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	C15orf52	Q6ZUT6	534 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	TREML1	Q86YW5	311 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	ERC1	Q8IUD2	1116 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	CACTIN-AS1	Q8N1I8	211 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	CERS5	Q8N5B7	392 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	VGLL2	Q8N8G2	317 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	WDR66	Q8TBY9	1149 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	TBC1D22A	Q8WUA7	517 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	BAD	Q92934	168 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	COL26A1	Q96A83	441 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	PRMT6	Q96LA8	375 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	RNPC3	Q96LT9	517 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	TDRD3	Q9H7E2	651 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	ZBTB40	Q9NUA8	1239 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	RAI14	Q9P0K7	980 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	LRP2BP	Q9P2M1	347 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	PRKAG2	Q9UGJ0	569 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	OGDHL	Q9ULD0	1010 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	DENND2A	Q9ULE3	1009 aa		5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.66	□□□□□ -1.5
ATXN3-231	ENST00000554994	TCP10L2	B9ZVM9	353 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	RAD21	O60216	631 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	SMNDC1	O75940	238 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	HMGCR	P04035	888 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	UQCRFS1P1	P0C7P4	283 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	SOX18	P35713	384 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	MTX1	Q13505	466 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	TNNI3K	Q59H18	835 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	LCE4A	Q5TA78	99 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	B4GALNT3	Q6L9W6	998 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	ANKRD23	Q86SG2	305 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	ERO1B	Q86YB8	467 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	DZIP1	Q86YF9	867 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	CLASRP	Q8N2M8	674 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	POU5F2	Q8N7G0	328 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	EXOC6	Q8TAG9	804 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	TEKT1	Q969V4	418 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	TIFA	Q96CG3	184 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	SPACA7	Q96KW9	195 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	PARK7	Q99497	189 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	NOL10	Q9BSC4	688 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	TMEM39B	Q9GZU3	492 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	SH2B1	Q9NRF2	756 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	ATP11B	Q9Y2G3	1177 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	KCNMB2	Q9Y691	235 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	FPGT-TNNI3K	V9GXZ4	949 aa		5.65	□□□□□ -1.5
ATXN3-231	ENST00000554994	SPTBN4	Q9H254	2564 aa		5.65	□□□□□ -1.51
ATXN3-231	ENST00000554994	MAST2	Q6P0Q8	1798 aa		5.65	□□□□□ -1.51
ATXN3-231	ENST00000554994	MYO9B	Q13459	2157 aa		5.65	□□□□□ -1.51
ATXN3-231	ENST00000554994	PRR33	A8MZF0	331 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	GAS2	O43903	313 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	ADAM11	O75078	769 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	RAB11FIP3	O75154	756 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	CRK	P46108	304 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	CACNB3	P54284	484 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	EPHB4	P54760	987 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	RTP1	P59025	263 aa		5.64	□□□□□ -1.51
ATXN3-231	ENST00000554994	TCP10	Q12799	353 aa		5.64	□□□□□ -1.51

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