RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ATP8B1O43520 1251 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
SRP54-205ENST00000554803 ERCC3P19447 782 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 LIFRP42702 1097 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 NT5C2P49902 561 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 ACLYP53396 1101 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 CCT2P78371 535 aaKnown RBP12.58□□□□□ -0.4
SRP54-205ENST00000554803 MYL5Q02045 173 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 CCDC144BQ3MJ40 725 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 CCDC144CPQ8IYA2 1237 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 TMTC2Q8N394 836 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 TRIML1Q8N9V2 468 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 NACAP1Q9BZK3 213 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
SRP54-205ENST00000554803 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
SRP54-205ENST00000554803 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 DDX41Q9UJV9 622 aaKnown RBP12.58□□□□□ -0.4
SRP54-205ENST00000554803 USP34Q70CQ2 3546 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 MOXD2PA6NHM9 499 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 MINDY4BA8MYZ0 360 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 USP17L12C9JPN9 530 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 USP17L21D6R901 530 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 ZNF202O95125 648 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 HLA-DOAP06340 250 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 U2AF2P26368 475 aaKnown RBP eCLIP12.57□□□□□ -0.4
SRP54-205ENST00000554803 CDK7P50613 346 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 NHLH1Q02575 133 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 TPRNQ4KMQ1 711 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 IL23AQ9NPF7 189 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 ARGLU1Q9NWB6 273 aaPredicted RBP12.57□□□□□ -0.4
SRP54-205ENST00000554803 MCM9Q9NXL9 1143 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 HPSEQ9Y251 543 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 MTCH2Q9Y6C9 303 aa12.57□□□□□ -0.4
SRP54-205ENST00000554803 BMP15O95972 392 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 AKR1A1P14550 325 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 SYKP43405 635 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 METAP2P50579 478 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRP54-205ENST00000554803 NDUFA8P51970 172 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 PPARAQ07869 468 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRP54-205ENST00000554803 SBK1Q52WX2 424 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
SRP54-205ENST00000554803 TATDN1Q6P1N9 297 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 KRT222Q8N1A0 295 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
SRP54-205ENST00000554803 ACER1Q8TDN7 264 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 LRRC2Q9BYS8 371 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 MROH8Q9H579 483 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 CEP131Q9UPN4 1083 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 COL4A4P53420 1690 aaPredicted RBP12.56□□□□□ -0.4
SRP54-205ENST00000554803 NEDD4P46934 1319 aa12.56□□□□□ -0.4
SRP54-205ENST00000554803 GREB1LQ9C091 1923 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 FGBP02675 491 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 ZNF865P0CJ78 1059 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 PLCD1P51178 756 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 CEBPZQ03701 1054 aaKnown RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 COG2Q14746 738 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 SART3Q15020 963 aaKnown RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 CCSAPQ6IQ19 270 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 KLHDC9Q8NEP7 349 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 LENG1Q96BZ8 264 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 KRT23Q9C075 422 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 KCNH6Q9H252 994 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 ANAPC4Q9UJX5 808 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
SRP54-205ENST00000554803 PCDHA11Q9Y5I1 949 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 SCN5AQ14524 2016 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 SYNRGQ9UMZ2 1314 aa12.55□□□□□ -0.4
SRP54-205ENST00000554803 SMC2O95347 1197 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 POLR3DP05423 398 aaPredicted RBP12.54□□□□□ -0.4
SRP54-205ENST00000554803 FCER1AP12319 257 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 PFKFB1P16118 471 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 TAL1P17542 331 aaPredicted RBP12.54□□□□□ -0.4
SRP54-205ENST00000554803 RABGGTBP53611 331 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 GNL2Q13823 731 aaKnown RBP12.54□□□□□ -0.4
SRP54-205ENST00000554803 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
SRP54-205ENST00000554803 KCNA10Q16322 511 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 RILPL1Q5EBL4 403 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 FAM126BQ8IXS8 530 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 HLA-CQ95604 372 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms