RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CLEC10AQ8IUN9 316 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 SCYL3Q8IZE3 742 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 ANKRD13CQ8N6S4 541 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 SNX29Q8TEQ0 813 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 RUSC1Q9BVN2 902 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
ATXN3-229ENST00000554672 BHLHE41Q9C0J9 482 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-229ENST00000554672 USP40Q9NVE5 1235 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
ATXN3-229ENST00000554672 METTL12A8MUP2 240 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 COBLO75128 1261 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 PDE8BO95263 885 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 POLR3DP05423 398 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 COL6A1P12109 1028 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 USP5P45974 858 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 IKBKEQ14164 716 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 METTL24Q5JXM2 366 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 BEND4Q6ZU67 534 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 ZFPM1Q8IX07 1006 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 FAM161BQ96MY7 647 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 TMPRSS13Q9BYE2 586 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 AGTPBP1Q9UPW5 1226 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 DAGLAQ9Y4D2 1042 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-229ENST00000554672 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
ATXN3-229ENST00000554672 COL6A3P12111 3177 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 LOC100289279A0A1B0GTE1 492 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 TRIM75PA6NK02 468 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 F6X3S4 739 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 ENTPD3O75355 529 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 VAMP4O75379 141 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 ALDH1L1O75891 902 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 ABL1P00519 1130 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
ATXN3-229ENST00000554672 ESRRAP11474 423 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-229ENST00000554672 XRCC5P13010 732 aaKnown RBP6.02□□□□□ -1.45
ATXN3-229ENST00000554672 EHHADHQ08426 723 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 CCDC27Q2M243 656 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-229ENST00000554672 ASAP3Q8TDY4 903 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 DBNDD2Q9BQY9 259 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 IDI2Q9BXS1 227 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 NRSN2Q9GZP1 204 aa6.02□□□□□ -1.45
ATXN3-229ENST00000554672 PFASO15067 1338 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 KIF16BQ96L93 1317 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SART1O43290 800 aaKnown RBP6.01□□□□□ -1.45
ATXN3-229ENST00000554672 TIAF1O95411 115 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 LDHBP07195 334 aaKnown RBP6.01□□□□□ -1.45
ATXN3-229ENST00000554672 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 FGFR2P21802 821 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 ARL4DP49703 201 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 RGS3P49796 1198 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 LRRC26Q2I0M4 334 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 LRRC24Q50LG9 513 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SGO2Q562F6 1265 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 ZSCAN29Q8IWY8 852 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-229ENST00000554672 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SMG8Q8ND04 991 aaKnown RBP6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SHKBP1Q8TBC3 707 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 KAZALD1Q96I82 304 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SRCIN1Q9C0H9 1055 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 SOX17Q9H6I2 414 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-229ENST00000554672 GNL3LQ9NVN8 582 aaKnown RBP6.01□□□□□ -1.45
ATXN3-229ENST00000554672 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 LAMB1P07942 1786 aa6.01□□□□□ -1.45
ATXN3-229ENST00000554672 IL16Q14005 1332 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 ICMTO60725 284 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 DRD2P14416 443 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 SPINK2P20155 84 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 CACNB2Q08289 660 aaPredicted RBP6□□□□□ -1.45
ATXN3-229ENST00000554672 SPP2Q13103 211 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
ATXN3-229ENST00000554672 ZNF423Q2M1K9 1284 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 SPRED3Q2MJR0 410 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 RABL6Q3YEC7 729 aaPredicted RBP6□□□□□ -1.45
ATXN3-229ENST00000554672 FDX2Q6P4F2 183 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 SHISA5Q8N114 240 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 GPRC5AQ8NFJ5 357 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 TRIB2Q92519 343 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 LPIN2Q92539 896 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 TCF12Q99081 682 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 USP26Q9BXU7 913 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 SENP6Q9GZR1 1112 aaPredicted RBP6□□□□□ -1.45
ATXN3-229ENST00000554672 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
ATXN3-229ENST00000554672 KCNF1Q9H3M0 494 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 SUGCTQ9HAC7 445 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 MORF4L1Q9UBU8 362 aa6□□□□□ -1.45
ATXN3-229ENST00000554672 OAS3Q9Y6K5 1087 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms